Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.71■□□□□ 0.91
RPS4Y2Q8TD47 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
RPS4Y2Q8TD47 AC004812.2-201ENST00000611079 2094 ntBASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 AL157400.5-201ENST00000507624 621 ntBASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 AC025884.2-201ENST00000553429 711 ntBASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS4Y2Q8TD47 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 AC016575.1-201ENST00000607026 382 ntBASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.68■□□□□ 0.9
RPS4Y2Q8TD47 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4Y2Q8TD47 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS4Y2Q8TD47 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
RPS4Y2Q8TD47 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPS4Y2Q8TD47 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.66■□□□□ 0.9
RPS4Y2Q8TD47 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
RPS4Y2Q8TD47 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RPS4Y2Q8TD47 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.66■□□□□ 0.9
RPS4Y2Q8TD47 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPS4Y2Q8TD47 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.65■□□□□ 0.9
RPS4Y2Q8TD47 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4Y2Q8TD47 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4Y2Q8TD47 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4Y2Q8TD47 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPS4Y2Q8TD47 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPS4Y2Q8TD47 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPS4Y2Q8TD47 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPS4Y2Q8TD47 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 DUSP8P5-201ENST00000422884 1815 ntBASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.64■□□□□ 0.89
RPS4Y2Q8TD47 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 MIR639-201ENST00000384974 98 ntBASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPS4Y2Q8TD47 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.62■□□□□ 0.89
RPS4Y2Q8TD47 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPS4Y2Q8TD47 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.62■□□□□ 0.89
RPS4Y2Q8TD47 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.62■□□□□ 0.89
RPS4Y2Q8TD47 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4Y2Q8TD47 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4Y2Q8TD47 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.61■□□□□ 0.89
RPS4Y2Q8TD47 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RPS4Y2Q8TD47 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPS4Y2Q8TD47 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RPS4Y2Q8TD47 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 MIR3960-201ENST00000583311 91 ntBASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPS4Y2Q8TD47 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS4Y2Q8TD47 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.58■□□□□ 0.89
RPS4Y2Q8TD47 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RPS4Y2Q8TD47 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms