Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SVIPQ8NHG7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SVIPQ8NHG7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 AC138932.1-201ENST00000534164 6830 ntBASIC15.06■□□□□ 0
SVIPQ8NHG7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.06■□□□□ 0
SVIPQ8NHG7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.06■□□□□ 0
SVIPQ8NHG7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.06■□□□□ 0
SVIPQ8NHG7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SVIPQ8NHG7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SVIPQ8NHG7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.05■□□□□ 0
SVIPQ8NHG7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.05■□□□□ 0
SVIPQ8NHG7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SVIPQ8NHG7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.05■□□□□ 0
SVIPQ8NHG7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SVIPQ8NHG7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
SVIPQ8NHG7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SVIPQ8NHG7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.05■□□□□ -0
SVIPQ8NHG7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.04■□□□□ -0
SVIPQ8NHG7 AC139530.1-201ENST00000575312 1977 ntBASIC15.04■□□□□ -0
SVIPQ8NHG7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SVIPQ8NHG7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SVIPQ8NHG7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.04■□□□□ -0
SVIPQ8NHG7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.04■□□□□ -0
SVIPQ8NHG7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SVIPQ8NHG7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.03■□□□□ -0
SVIPQ8NHG7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SVIPQ8NHG7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.03■□□□□ -0
SVIPQ8NHG7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC15.03■□□□□ -0
SVIPQ8NHG7 AC120498.9-201ENST00000339021 3867 ntBASIC15.03■□□□□ -0
SVIPQ8NHG7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SVIPQ8NHG7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.02■□□□□ -0
SVIPQ8NHG7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SVIPQ8NHG7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.02■□□□□ -0
SVIPQ8NHG7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SVIPQ8NHG7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.02■□□□□ -0
SVIPQ8NHG7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SVIPQ8NHG7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SVIPQ8NHG7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.02□□□□□ -0.01
SVIPQ8NHG7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
SVIPQ8NHG7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
SVIPQ8NHG7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15□□□□□ -0.01
SVIPQ8NHG7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15□□□□□ -0.01
SVIPQ8NHG7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15□□□□□ -0.01
SVIPQ8NHG7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SVIPQ8NHG7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC15□□□□□ -0.01
SVIPQ8NHG7 AC020928.2-201ENST00000588717 2197 ntBASIC15□□□□□ -0.01
SVIPQ8NHG7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SVIPQ8NHG7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SVIPQ8NHG7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 LTB4R2-202ENST00000528054 3092 ntBASIC14.97□□□□□ -0.01
SVIPQ8NHG7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SVIPQ8NHG7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms