Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 KRT18P10-201ENST00000388836 1287 ntBASIC23.47■■□□□ 1.35
PHC3Q8NDX5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PHC3Q8NDX5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PHC3Q8NDX5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.47■■□□□ 1.35
PHC3Q8NDX5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PHC3Q8NDX5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
PHC3Q8NDX5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PHC3Q8NDX5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.46■■□□□ 1.35
PHC3Q8NDX5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
PHC3Q8NDX5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.46■■□□□ 1.35
PHC3Q8NDX5 MIR6765-201ENST00000614092 87 ntBASIC23.46■■□□□ 1.35
PHC3Q8NDX5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PHC3Q8NDX5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.45■■□□□ 1.34
PHC3Q8NDX5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PHC3Q8NDX5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PHC3Q8NDX5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PHC3Q8NDX5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PHC3Q8NDX5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.44■■□□□ 1.34
PHC3Q8NDX5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PHC3Q8NDX5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PHC3Q8NDX5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.44■■□□□ 1.34
PHC3Q8NDX5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PHC3Q8NDX5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PHC3Q8NDX5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PHC3Q8NDX5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PHC3Q8NDX5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.41■■□□□ 1.34
PHC3Q8NDX5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.41■■□□□ 1.34
PHC3Q8NDX5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PHC3Q8NDX5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PHC3Q8NDX5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PHC3Q8NDX5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PHC3Q8NDX5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PHC3Q8NDX5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PHC3Q8NDX5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.4■■□□□ 1.34
PHC3Q8NDX5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PHC3Q8NDX5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.4■■□□□ 1.34
PHC3Q8NDX5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PHC3Q8NDX5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PHC3Q8NDX5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PHC3Q8NDX5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.39■■□□□ 1.33
PHC3Q8NDX5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PHC3Q8NDX5 CLDN5-201ENST00000403084 2357 ntBASIC23.38■■□□□ 1.33
PHC3Q8NDX5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.38■■□□□ 1.33
PHC3Q8NDX5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PHC3Q8NDX5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PHC3Q8NDX5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 AC096887.2-201ENST00000623443 1957 ntBASIC23.37■■□□□ 1.33
PHC3Q8NDX5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PHC3Q8NDX5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.37■■□□□ 1.33
PHC3Q8NDX5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PHC3Q8NDX5 AC010501.1-201ENST00000606270 1962 ntBASIC23.36■■□□□ 1.33
PHC3Q8NDX5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PHC3Q8NDX5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PHC3Q8NDX5 BHLHE23-202ENST00000612929 1109 ntBASIC23.36■■□□□ 1.33
PHC3Q8NDX5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
PHC3Q8NDX5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PHC3Q8NDX5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PHC3Q8NDX5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms