Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF149Q8NC42 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF149Q8NC42 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
RNF149Q8NC42 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF149Q8NC42 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.05■■□□□ 1.76
RNF149Q8NC42 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF149Q8NC42 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF149Q8NC42 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF149Q8NC42 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF149Q8NC42 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF149Q8NC42 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RNF149Q8NC42 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RNF149Q8NC42 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.04■■□□□ 1.76
RNF149Q8NC42 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.04■■□□□ 1.76
RNF149Q8NC42 DUSP8P4-201ENST00000399538 1761 ntBASIC26.04■■□□□ 1.76
RNF149Q8NC42 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RNF149Q8NC42 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
RNF149Q8NC42 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RNF149Q8NC42 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF149Q8NC42 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF149Q8NC42 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.03■■□□□ 1.76
RNF149Q8NC42 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.03■■□□□ 1.76
RNF149Q8NC42 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF149Q8NC42 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF149Q8NC42 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF149Q8NC42 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RNF149Q8NC42 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF149Q8NC42 AC239859.2-201ENST00000444165 318 ntBASIC26.02■■□□□ 1.76
RNF149Q8NC42 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RNF149Q8NC42 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF149Q8NC42 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
RNF149Q8NC42 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
RNF149Q8NC42 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RNF149Q8NC42 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
RNF149Q8NC42 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RNF149Q8NC42 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26■■□□□ 1.75
RNF149Q8NC42 AC145676.1-201ENST00000514988 2004 ntBASIC26■■□□□ 1.75
RNF149Q8NC42 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF149Q8NC42 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.99■■□□□ 1.75
RNF149Q8NC42 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF149Q8NC42 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF149Q8NC42 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF149Q8NC42 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
RNF149Q8NC42 GUSBP5-201ENST00000418136 578 ntBASIC25.99■■□□□ 1.75
RNF149Q8NC42 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.99■■□□□ 1.75
RNF149Q8NC42 Z92544.1-202ENST00000571933 1220 ntBASIC25.99■■□□□ 1.75
RNF149Q8NC42 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF149Q8NC42 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
RNF149Q8NC42 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RNF149Q8NC42 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF149Q8NC42 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.97■■□□□ 1.75
RNF149Q8NC42 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF149Q8NC42 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF149Q8NC42 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF149Q8NC42 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RNF149Q8NC42 MIR4281-201ENST00000580852 62 ntBASIC25.97■■□□□ 1.75
RNF149Q8NC42 AC011551.1-201ENST00000614101 683 ntBASIC25.97■■□□□ 1.75
RNF149Q8NC42 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF149Q8NC42 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RNF149Q8NC42 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF149Q8NC42 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.97■■□□□ 1.75
RNF149Q8NC42 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF149Q8NC42 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RNF149Q8NC42 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.96■■□□□ 1.75
RNF149Q8NC42 BX664725.1-201ENST00000438252 379 ntBASIC25.96■■□□□ 1.75
RNF149Q8NC42 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.96■■□□□ 1.75
RNF149Q8NC42 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF149Q8NC42 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF149Q8NC42 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.96■■□□□ 1.75
RNF149Q8NC42 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.95■■□□□ 1.74
RNF149Q8NC42 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.95■■□□□ 1.74
RNF149Q8NC42 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
RNF149Q8NC42 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RNF149Q8NC42 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
RNF149Q8NC42 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF149Q8NC42 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.94■■□□□ 1.74
RNF149Q8NC42 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF149Q8NC42 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF149Q8NC42 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF149Q8NC42 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.94■■□□□ 1.74
RNF149Q8NC42 AC137630.3-201ENST00000607245 391 ntBASIC25.94■■□□□ 1.74
RNF149Q8NC42 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.94■■□□□ 1.74
RNF149Q8NC42 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.94■■□□□ 1.74
RNF149Q8NC42 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RNF149Q8NC42 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF149Q8NC42 KRT125P-201ENST00000546827 989 ntBASIC25.93■■□□□ 1.74
RNF149Q8NC42 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF149Q8NC42 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF149Q8NC42 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF149Q8NC42 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF149Q8NC42 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RNF149Q8NC42 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF149Q8NC42 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms