Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 MIR935-201ENST00000401179 91 ntBASIC25.58■■□□□ 1.69
COLGALT1Q8NBJ5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COLGALT1Q8NBJ5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.58■■□□□ 1.69
COLGALT1Q8NBJ5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
COLGALT1Q8NBJ5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.57■■□□□ 1.68
COLGALT1Q8NBJ5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COLGALT1Q8NBJ5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.57■■□□□ 1.68
COLGALT1Q8NBJ5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COLGALT1Q8NBJ5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 AC131281.2-201ENST00000520478 145 ntBASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
COLGALT1Q8NBJ5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
COLGALT1Q8NBJ5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
COLGALT1Q8NBJ5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.54■■□□□ 1.68
COLGALT1Q8NBJ5 MIR638-201ENST00000385237 100 ntBASIC25.54■■□□□ 1.68
COLGALT1Q8NBJ5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COLGALT1Q8NBJ5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.54■■□□□ 1.68
COLGALT1Q8NBJ5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 AC010997.5-201ENST00000609182 354 ntBASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 AC011551.1-201ENST00000614101 683 ntBASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COLGALT1Q8NBJ5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 AL117332.1-201ENST00000622628 974 ntBASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COLGALT1Q8NBJ5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.51■■□□□ 1.67
COLGALT1Q8NBJ5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.5■■□□□ 1.67
COLGALT1Q8NBJ5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
COLGALT1Q8NBJ5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
COLGALT1Q8NBJ5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.5■■□□□ 1.67
COLGALT1Q8NBJ5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.5■■□□□ 1.67
COLGALT1Q8NBJ5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.5■■□□□ 1.67
COLGALT1Q8NBJ5 MTDHP2-201ENST00000601468 714 ntBASIC25.5■■□□□ 1.67
COLGALT1Q8NBJ5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 AL139246.5-201ENST00000606645 996 ntBASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 MIR6724-1-201ENST00000616420 92 ntBASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 MIR6724-2-201ENST00000616483 92 ntBASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 MIR6724-4-201ENST00000617390 92 ntBASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 MIR6724-3-201ENST00000622482 92 ntBASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COLGALT1Q8NBJ5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 AL136116.3-201ENST00000402907 1138 ntBASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
COLGALT1Q8NBJ5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COLGALT1Q8NBJ5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COLGALT1Q8NBJ5 MIR3621-201ENST00000580529 85 ntBASIC25.47■■□□□ 1.67
COLGALT1Q8NBJ5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COLGALT1Q8NBJ5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.46■■□□□ 1.67
COLGALT1Q8NBJ5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.46■■□□□ 1.67
COLGALT1Q8NBJ5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.46■■□□□ 1.67
COLGALT1Q8NBJ5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COLGALT1Q8NBJ5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
COLGALT1Q8NBJ5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
COLGALT1Q8NBJ5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COLGALT1Q8NBJ5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COLGALT1Q8NBJ5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.45■■□□□ 1.66
COLGALT1Q8NBJ5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms