Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC097639.1-201ENST00000565519 1891 ntBASIC24.08■■□□□ 1.45
PCDH20Q8N6Y1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH20Q8N6Y1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 AL451085.2-201ENST00000605085 799 ntBASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDH20Q8N6Y1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH20Q8N6Y1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH20Q8N6Y1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDH20Q8N6Y1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.06■■□□□ 1.44
PCDH20Q8N6Y1 AL031848.2-201ENST00000607670 837 ntBASIC24.06■■□□□ 1.44
PCDH20Q8N6Y1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDH20Q8N6Y1 DUSP8P4-201ENST00000399538 1761 ntBASIC24.06■■□□□ 1.44
PCDH20Q8N6Y1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH20Q8N6Y1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDH20Q8N6Y1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH20Q8N6Y1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH20Q8N6Y1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH20Q8N6Y1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
PCDH20Q8N6Y1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
PCDH20Q8N6Y1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH20Q8N6Y1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PCDH20Q8N6Y1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH20Q8N6Y1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH20Q8N6Y1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
PCDH20Q8N6Y1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH20Q8N6Y1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDH20Q8N6Y1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH20Q8N6Y1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH20Q8N6Y1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 AC145676.1-201ENST00000514988 2004 ntBASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH20Q8N6Y1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH20Q8N6Y1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH20Q8N6Y1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH20Q8N6Y1 AC020928.2-201ENST00000588717 2197 ntBASIC24.01■■□□□ 1.43
PCDH20Q8N6Y1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH20Q8N6Y1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDH20Q8N6Y1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH20Q8N6Y1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24■■□□□ 1.43
PCDH20Q8N6Y1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH20Q8N6Y1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24■■□□□ 1.43
PCDH20Q8N6Y1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH20Q8N6Y1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24■■□□□ 1.43
PCDH20Q8N6Y1 KRT18P24-201ENST00000344739 1156 ntBASIC24■■□□□ 1.43
PCDH20Q8N6Y1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH20Q8N6Y1 AL035685.1-201ENST00000636663 812 ntBASIC24■■□□□ 1.43
PCDH20Q8N6Y1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24■■□□□ 1.43
PCDH20Q8N6Y1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 FOXO3B-201ENST00000395675 1928 ntBASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
PCDH20Q8N6Y1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 AC009299.2-201ENST00000482477 511 ntBASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH20Q8N6Y1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
PCDH20Q8N6Y1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH20Q8N6Y1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH20Q8N6Y1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDH20Q8N6Y1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH20Q8N6Y1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH20Q8N6Y1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PCDH20Q8N6Y1 THA1P-201ENST00000590384 1145 ntBASIC23.96■■□□□ 1.43
PCDH20Q8N6Y1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH20Q8N6Y1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH20Q8N6Y1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH20Q8N6Y1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDH20Q8N6Y1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDH20Q8N6Y1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDH20Q8N6Y1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH20Q8N6Y1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms