Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TTC39CQ8N584 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TTC39CQ8N584 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
TTC39CQ8N584 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC39CQ8N584 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC39CQ8N584 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.18■■□□□ 1.62
TTC39CQ8N584 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC39CQ8N584 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC39CQ8N584 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TTC39CQ8N584 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TTC39CQ8N584 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.17■■□□□ 1.62
TTC39CQ8N584 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TTC39CQ8N584 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.16■■□□□ 1.62
TTC39CQ8N584 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.16■■□□□ 1.62
TTC39CQ8N584 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.16■■□□□ 1.62
TTC39CQ8N584 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.16■■□□□ 1.62
TTC39CQ8N584 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
TTC39CQ8N584 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
TTC39CQ8N584 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TTC39CQ8N584 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TTC39CQ8N584 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TTC39CQ8N584 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.15■■□□□ 1.62
TTC39CQ8N584 MIR4508-201ENST00000584178 70 ntBASIC25.15■■□□□ 1.62
TTC39CQ8N584 PVT1_1.1-201ENST00000615125 194 ntBASIC25.15■■□□□ 1.62
TTC39CQ8N584 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TTC39CQ8N584 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TTC39CQ8N584 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
TTC39CQ8N584 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
TTC39CQ8N584 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TTC39CQ8N584 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TTC39CQ8N584 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
TTC39CQ8N584 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TTC39CQ8N584 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.14■■□□□ 1.61
TTC39CQ8N584 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TTC39CQ8N584 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TTC39CQ8N584 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TTC39CQ8N584 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.13■■□□□ 1.61
TTC39CQ8N584 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TTC39CQ8N584 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TTC39CQ8N584 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.12■■□□□ 1.61
TTC39CQ8N584 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.12■■□□□ 1.61
TTC39CQ8N584 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.12■■□□□ 1.61
TTC39CQ8N584 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.12■■□□□ 1.61
TTC39CQ8N584 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.12■■□□□ 1.61
TTC39CQ8N584 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC39CQ8N584 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TTC39CQ8N584 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
TTC39CQ8N584 AC011551.1-201ENST00000614101 683 ntBASIC25.11■■□□□ 1.61
TTC39CQ8N584 MIR6089-201ENST00000616698 64 ntBASIC25.11■■□□□ 1.61
TTC39CQ8N584 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TTC39CQ8N584 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TTC39CQ8N584 AC020928.2-201ENST00000588717 2197 ntBASIC25.11■■□□□ 1.61
TTC39CQ8N584 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC39CQ8N584 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC39CQ8N584 YBX1P4-201ENST00000392794 808 ntBASIC25.1■■□□□ 1.61
TTC39CQ8N584 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC39CQ8N584 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC39CQ8N584 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC39CQ8N584 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TTC39CQ8N584 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.09■■□□□ 1.61
TTC39CQ8N584 AC142381.3-201ENST00000568208 1670 ntBASIC25.09■■□□□ 1.61
TTC39CQ8N584 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39CQ8N584 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39CQ8N584 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.09■■□□□ 1.61
TTC39CQ8N584 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39CQ8N584 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39CQ8N584 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39CQ8N584 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC39CQ8N584 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
TTC39CQ8N584 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TTC39CQ8N584 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.08■■□□□ 1.61
TTC39CQ8N584 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC39CQ8N584 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.08■■□□□ 1.61
TTC39CQ8N584 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC39CQ8N584 AC022211.4-201ENST00000625094 2161 ntBASIC25.08■■□□□ 1.61
TTC39CQ8N584 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
TTC39CQ8N584 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.08■■□□□ 1.6
TTC39CQ8N584 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TTC39CQ8N584 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.08■■□□□ 1.6
TTC39CQ8N584 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TTC39CQ8N584 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39CQ8N584 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39CQ8N584 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39CQ8N584 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
TTC39CQ8N584 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC39CQ8N584 KRT18P24-201ENST00000344739 1156 ntBASIC25.06■■□□□ 1.6
TTC39CQ8N584 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC39CQ8N584 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TTC39CQ8N584 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.06■■□□□ 1.6
TTC39CQ8N584 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC39CQ8N584 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC39CQ8N584 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.05■■□□□ 1.6
TTC39CQ8N584 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms