Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 KRT18P10-201ENST00000388836 1287 ntBASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 AL157400.5-201ENST00000507624 621 ntBASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 MIR3648-2-201ENST00000581792 180 ntBASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 MIR3648-1-201ENST00000615959 180 ntBASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 SMPD5-203ENST00000639008 1464 ntBASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 AC133561.1-201ENST00000568600 2415 ntBASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 DUSP8P5-201ENST00000422884 1815 ntBASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms