Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC44A2Q8IWA5 AL592293.1-201ENST00000502889 1188 ntBASIC22.26■■□□□ 1.15
SLC44A2Q8IWA5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SLC44A2Q8IWA5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC44A2Q8IWA5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC44A2Q8IWA5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC44A2Q8IWA5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC44A2Q8IWA5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC44A2Q8IWA5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC44A2Q8IWA5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC44A2Q8IWA5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC44A2Q8IWA5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC44A2Q8IWA5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC44A2Q8IWA5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC44A2Q8IWA5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC44A2Q8IWA5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC44A2Q8IWA5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC44A2Q8IWA5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC44A2Q8IWA5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC44A2Q8IWA5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC44A2Q8IWA5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SLC44A2Q8IWA5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC44A2Q8IWA5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC44A2Q8IWA5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC44A2Q8IWA5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC44A2Q8IWA5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
SLC44A2Q8IWA5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC44A2Q8IWA5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.21■■□□□ 1.15
SLC44A2Q8IWA5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC44A2Q8IWA5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SLC44A2Q8IWA5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLC44A2Q8IWA5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
SLC44A2Q8IWA5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.2■■□□□ 1.15
SLC44A2Q8IWA5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
SLC44A2Q8IWA5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.2■■□□□ 1.14
SLC44A2Q8IWA5 NTF6A-201ENST00000591175 560 ntBASIC22.2■■□□□ 1.14
SLC44A2Q8IWA5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.2■■□□□ 1.14
SLC44A2Q8IWA5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLC44A2Q8IWA5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLC44A2Q8IWA5 SLC6A10P-202ENST00000431994 2058 ntBASIC22.19■■□□□ 1.14
SLC44A2Q8IWA5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.19■■□□□ 1.14
SLC44A2Q8IWA5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC44A2Q8IWA5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLC44A2Q8IWA5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC44A2Q8IWA5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLC44A2Q8IWA5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 KRT18P60-201ENST00000312876 1297 ntBASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.18■■□□□ 1.14
SLC44A2Q8IWA5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC44A2Q8IWA5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SLC44A2Q8IWA5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SLC44A2Q8IWA5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC44A2Q8IWA5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SLC44A2Q8IWA5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 AL139125.2-201ENST00000623134 1869 ntBASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 AC018755.3-202ENST00000596210 929 ntBASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC44A2Q8IWA5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC44A2Q8IWA5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.15■■□□□ 1.14
SLC44A2Q8IWA5 SPCS2P3-201ENST00000500401 656 ntBASIC22.15■■□□□ 1.14
SLC44A2Q8IWA5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC44A2Q8IWA5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
SLC44A2Q8IWA5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SLC44A2Q8IWA5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SLC44A2Q8IWA5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC44A2Q8IWA5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC44A2Q8IWA5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLC44A2Q8IWA5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC44A2Q8IWA5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC44A2Q8IWA5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SLC44A2Q8IWA5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC44A2Q8IWA5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC44A2Q8IWA5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A2Q8IWA5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A2Q8IWA5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A2Q8IWA5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A2Q8IWA5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC44A2Q8IWA5 DUX4L9-201ENST00000449051 1259 ntBASIC22.13■■□□□ 1.13
SLC44A2Q8IWA5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms