Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RETREG3Q86VR2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
RETREG3Q86VR2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RETREG3Q86VR2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.51■■□□□ 1.19
RETREG3Q86VR2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG3Q86VR2 ZNRF2P2-203ENST00000454624 420 ntBASIC22.51■■□□□ 1.19
RETREG3Q86VR2 AC126177.7-201ENST00000547904 679 ntBASIC22.51■■□□□ 1.19
RETREG3Q86VR2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.51■■□□□ 1.19
RETREG3Q86VR2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.51■■□□□ 1.19
RETREG3Q86VR2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG3Q86VR2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.49■■□□□ 1.19
RETREG3Q86VR2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG3Q86VR2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.49■■□□□ 1.19
RETREG3Q86VR2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG3Q86VR2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RETREG3Q86VR2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG3Q86VR2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG3Q86VR2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RETREG3Q86VR2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.47■■□□□ 1.19
RETREG3Q86VR2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RETREG3Q86VR2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RETREG3Q86VR2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.47■■□□□ 1.19
RETREG3Q86VR2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.46■■□□□ 1.19
RETREG3Q86VR2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.45■■□□□ 1.19
RETREG3Q86VR2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RETREG3Q86VR2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RETREG3Q86VR2 ABCB10P4-201ENST00000566803 2184 ntBASIC22.45■■□□□ 1.18
RETREG3Q86VR2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RETREG3Q86VR2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.45■■□□□ 1.18
RETREG3Q86VR2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RETREG3Q86VR2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
RETREG3Q86VR2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RETREG3Q86VR2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RETREG3Q86VR2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG3Q86VR2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG3Q86VR2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG3Q86VR2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.44■■□□□ 1.18
RETREG3Q86VR2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.44■■□□□ 1.18
RETREG3Q86VR2 AL157400.5-201ENST00000507624 621 ntBASIC22.44■■□□□ 1.18
RETREG3Q86VR2 MIR6089-201ENST00000616698 64 ntBASIC22.44■■□□□ 1.18
RETREG3Q86VR2 DUSP8P5-201ENST00000422884 1815 ntBASIC22.43■■□□□ 1.18
RETREG3Q86VR2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.43■■□□□ 1.18
RETREG3Q86VR2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.43■■□□□ 1.18
RETREG3Q86VR2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG3Q86VR2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG3Q86VR2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.43■■□□□ 1.18
RETREG3Q86VR2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
RETREG3Q86VR2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG3Q86VR2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.42■■□□□ 1.18
RETREG3Q86VR2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG3Q86VR2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG3Q86VR2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG3Q86VR2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 AC025884.2-201ENST00000553429 711 ntBASIC22.41■■□□□ 1.18
RETREG3Q86VR2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG3Q86VR2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG3Q86VR2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RETREG3Q86VR2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG3Q86VR2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG3Q86VR2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.4■■□□□ 1.18
RETREG3Q86VR2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG3Q86VR2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
RETREG3Q86VR2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RETREG3Q86VR2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RETREG3Q86VR2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RETREG3Q86VR2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.39■■□□□ 1.17
RETREG3Q86VR2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms