Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RSPH3Q86UC2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RSPH3Q86UC2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
RSPH3Q86UC2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RSPH3Q86UC2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RSPH3Q86UC2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RSPH3Q86UC2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RSPH3Q86UC2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RSPH3Q86UC2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RSPH3Q86UC2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RSPH3Q86UC2 AC010997.5-201ENST00000609182 354 ntBASIC26.07■■□□□ 1.76
RSPH3Q86UC2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.07■■□□□ 1.76
RSPH3Q86UC2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RSPH3Q86UC2 FOXO3B-201ENST00000395675 1928 ntBASIC26.06■■□□□ 1.76
RSPH3Q86UC2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RSPH3Q86UC2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.06■■□□□ 1.76
RSPH3Q86UC2 MTDHP2-201ENST00000601468 714 ntBASIC26.06■■□□□ 1.76
RSPH3Q86UC2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
RSPH3Q86UC2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.06■■□□□ 1.76
RSPH3Q86UC2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RSPH3Q86UC2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RSPH3Q86UC2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RSPH3Q86UC2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RSPH3Q86UC2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.05■■□□□ 1.76
RSPH3Q86UC2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.04■■□□□ 1.76
RSPH3Q86UC2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.04■■□□□ 1.76
RSPH3Q86UC2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RSPH3Q86UC2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RSPH3Q86UC2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.04■■□□□ 1.76
RSPH3Q86UC2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RSPH3Q86UC2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RSPH3Q86UC2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RSPH3Q86UC2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RSPH3Q86UC2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.03■■□□□ 1.76
RSPH3Q86UC2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RSPH3Q86UC2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.02■■□□□ 1.76
RSPH3Q86UC2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RSPH3Q86UC2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RSPH3Q86UC2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RSPH3Q86UC2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RSPH3Q86UC2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 MIR6724-1-201ENST00000616420 92 ntBASIC26.01■■□□□ 1.75
RSPH3Q86UC2 MIR6724-2-201ENST00000616483 92 ntBASIC26.01■■□□□ 1.75
RSPH3Q86UC2 MIR6724-4-201ENST00000617390 92 ntBASIC26.01■■□□□ 1.75
RSPH3Q86UC2 MIR6724-3-201ENST00000622482 92 ntBASIC26.01■■□□□ 1.75
RSPH3Q86UC2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RSPH3Q86UC2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
RSPH3Q86UC2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26■■□□□ 1.75
RSPH3Q86UC2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26■■□□□ 1.75
RSPH3Q86UC2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26■■□□□ 1.75
RSPH3Q86UC2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26■■□□□ 1.75
RSPH3Q86UC2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26■■□□□ 1.75
RSPH3Q86UC2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26■■□□□ 1.75
RSPH3Q86UC2 SRR-208ENST00000576848 588 ntTSL 4 BASIC26■■□□□ 1.75
RSPH3Q86UC2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26■■□□□ 1.75
RSPH3Q86UC2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26■■□□□ 1.75
RSPH3Q86UC2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RSPH3Q86UC2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.99■■□□□ 1.75
RSPH3Q86UC2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RSPH3Q86UC2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.99■■□□□ 1.75
RSPH3Q86UC2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.99■■□□□ 1.75
RSPH3Q86UC2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RSPH3Q86UC2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
RSPH3Q86UC2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RSPH3Q86UC2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.98■■□□□ 1.75
RSPH3Q86UC2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.98■■□□□ 1.75
RSPH3Q86UC2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
RSPH3Q86UC2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.98■■□□□ 1.75
RSPH3Q86UC2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.98■■□□□ 1.75
RSPH3Q86UC2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
RSPH3Q86UC2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RSPH3Q86UC2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RSPH3Q86UC2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RSPH3Q86UC2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.97■■□□□ 1.75
RSPH3Q86UC2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
RSPH3Q86UC2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RSPH3Q86UC2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.97■■□□□ 1.75
RSPH3Q86UC2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
RSPH3Q86UC2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RSPH3Q86UC2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RSPH3Q86UC2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.96■■□□□ 1.75
RSPH3Q86UC2 AL117332.1-201ENST00000622628 974 ntBASIC25.96■■□□□ 1.75
RSPH3Q86UC2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RSPH3Q86UC2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
RSPH3Q86UC2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.95■■□□□ 1.75
RSPH3Q86UC2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
RSPH3Q86UC2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms