Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf88Q6PI97 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 AC068473.5-201ENST00000616428 2072 ntBASIC20.29■□□□□ 0.84
C11orf88Q6PI97 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C11orf88Q6PI97 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
C11orf88Q6PI97 AC110285.7-201ENST00000624417 1536 ntBASIC20.27■□□□□ 0.84
C11orf88Q6PI97 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.27■□□□□ 0.84
C11orf88Q6PI97 AC079834.2-201ENST00000609776 1949 ntBASIC20.27■□□□□ 0.84
C11orf88Q6PI97 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
C11orf88Q6PI97 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
C11orf88Q6PI97 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
C11orf88Q6PI97 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C11orf88Q6PI97 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 WHAMMP3-201ENST00000611636 1609 ntBASIC20.25■□□□□ 0.83
C11orf88Q6PI97 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C11orf88Q6PI97 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.24■□□□□ 0.83
C11orf88Q6PI97 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.24■□□□□ 0.83
C11orf88Q6PI97 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
C11orf88Q6PI97 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.24■□□□□ 0.83
C11orf88Q6PI97 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.24■□□□□ 0.83
C11orf88Q6PI97 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 LINC00543-201ENST00000567234 1845 ntBASIC20.23■□□□□ 0.83
C11orf88Q6PI97 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.23■□□□□ 0.83
C11orf88Q6PI97 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C11orf88Q6PI97 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
C11orf88Q6PI97 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
C11orf88Q6PI97 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
C11orf88Q6PI97 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.22■□□□□ 0.83
C11orf88Q6PI97 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
C11orf88Q6PI97 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C11orf88Q6PI97 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
C11orf88Q6PI97 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C11orf88Q6PI97 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms