Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.33■□□□□ 0.85
ATPAF1Q5TC12 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATPAF1Q5TC12 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
ATPAF1Q5TC12 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ATPAF1Q5TC12 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ATPAF1Q5TC12 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.85
ATPAF1Q5TC12 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATPAF1Q5TC12 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.33■□□□□ 0.84
ATPAF1Q5TC12 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATPAF1Q5TC12 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATPAF1Q5TC12 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF1Q5TC12 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF1Q5TC12 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF1Q5TC12 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF1Q5TC12 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.32■□□□□ 0.84
ATPAF1Q5TC12 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATPAF1Q5TC12 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.31■□□□□ 0.84
ATPAF1Q5TC12 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF1Q5TC12 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF1Q5TC12 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.31■□□□□ 0.84
ATPAF1Q5TC12 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF1Q5TC12 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATPAF1Q5TC12 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 AC093536.1-201ENST00000569153 554 ntBASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATPAF1Q5TC12 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ATPAF1Q5TC12 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF1Q5TC12 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATPAF1Q5TC12 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF1Q5TC12 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF1Q5TC12 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ATPAF1Q5TC12 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATPAF1Q5TC12 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATPAF1Q5TC12 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF1Q5TC12 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATPAF1Q5TC12 AC026202.3-201ENST00000600805 1127 ntBASIC20.27■□□□□ 0.84
ATPAF1Q5TC12 RAP2CP1-202ENST00000605179 643 ntBASIC20.27■□□□□ 0.84
ATPAF1Q5TC12 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATPAF1Q5TC12 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATPAF1Q5TC12 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATPAF1Q5TC12 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.25■□□□□ 0.83
ATPAF1Q5TC12 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.25■□□□□ 0.83
ATPAF1Q5TC12 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.25■□□□□ 0.83
ATPAF1Q5TC12 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 AC068473.5-201ENST00000616428 2072 ntBASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 ABHD17AP5-201ENST00000580133 923 ntBASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATPAF1Q5TC12 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 AC133552.2-201ENST00000619106 1032 ntBASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 LINC01124-201ENST00000409786 2117 ntBASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 AC096887.2-201ENST00000623443 1957 ntBASIC20.23■□□□□ 0.83
ATPAF1Q5TC12 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 AC009831.1-201ENST00000580420 1582 ntBASIC20.22■□□□□ 0.83
ATPAF1Q5TC12 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms