Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RBM48Q5RL73 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM48Q5RL73 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RBM48Q5RL73 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.53■■□□□ 1.04
RBM48Q5RL73 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBM48Q5RL73 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBM48Q5RL73 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
RBM48Q5RL73 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.52■■□□□ 1.04
RBM48Q5RL73 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.52■■□□□ 1.03
RBM48Q5RL73 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM48Q5RL73 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM48Q5RL73 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM48Q5RL73 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM48Q5RL73 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.51■■□□□ 1.03
RBM48Q5RL73 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM48Q5RL73 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM48Q5RL73 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM48Q5RL73 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.5■■□□□ 1.03
RBM48Q5RL73 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
RBM48Q5RL73 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM48Q5RL73 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.5■■□□□ 1.03
RBM48Q5RL73 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM48Q5RL73 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM48Q5RL73 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.5■■□□□ 1.03
RBM48Q5RL73 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RBM48Q5RL73 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RBM48Q5RL73 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.49■■□□□ 1.03
RBM48Q5RL73 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.49■■□□□ 1.03
RBM48Q5RL73 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RBM48Q5RL73 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.49■■□□□ 1.03
RBM48Q5RL73 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RBM48Q5RL73 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.49■■□□□ 1.03
RBM48Q5RL73 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RBM48Q5RL73 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RBM48Q5RL73 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RBM48Q5RL73 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RBM48Q5RL73 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.48■■□□□ 1.03
RBM48Q5RL73 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.48■■□□□ 1.03
RBM48Q5RL73 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.48■■□□□ 1.03
RBM48Q5RL73 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RBM48Q5RL73 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RBM48Q5RL73 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.47■■□□□ 1.03
RBM48Q5RL73 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RBM48Q5RL73 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.47■■□□□ 1.03
RBM48Q5RL73 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
RBM48Q5RL73 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.46■■□□□ 1.03
RBM48Q5RL73 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.46■■□□□ 1.03
RBM48Q5RL73 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.46■■□□□ 1.03
RBM48Q5RL73 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.46■■□□□ 1.03
RBM48Q5RL73 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.45■■□□□ 1.02
RBM48Q5RL73 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.45■■□□□ 1.02
RBM48Q5RL73 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.45■■□□□ 1.02
RBM48Q5RL73 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RBM48Q5RL73 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.45■■□□□ 1.02
RBM48Q5RL73 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RBM48Q5RL73 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RBM48Q5RL73 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RBM48Q5RL73 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RBM48Q5RL73 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RBM48Q5RL73 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RBM48Q5RL73 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RBM48Q5RL73 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RBM48Q5RL73 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RBM48Q5RL73 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RBM48Q5RL73 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RBM48Q5RL73 SUZ12P1-203ENST00000578195 985 ntBASIC21.44■■□□□ 1.02
RBM48Q5RL73 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RBM48Q5RL73 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RBM48Q5RL73 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RBM48Q5RL73 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.43■■□□□ 1.02
RBM48Q5RL73 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RBM48Q5RL73 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.43■■□□□ 1.02
RBM48Q5RL73 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RBM48Q5RL73 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RBM48Q5RL73 LINC00565-201ENST00000562710 2331 ntBASIC21.43■■□□□ 1.02
RBM48Q5RL73 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RBM48Q5RL73 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RBM48Q5RL73 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RBM48Q5RL73 AC233723.2-201ENST00000623798 2106 ntBASIC21.43■■□□□ 1.02
RBM48Q5RL73 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.43■■□□□ 1.02
RBM48Q5RL73 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RBM48Q5RL73 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RBM48Q5RL73 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RBM48Q5RL73 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RBM48Q5RL73 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
RBM48Q5RL73 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RBM48Q5RL73 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RBM48Q5RL73 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
RBM48Q5RL73 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.41■■□□□ 1.02
RBM48Q5RL73 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RBM48Q5RL73 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RBM48Q5RL73 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RBM48Q5RL73 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms