Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NCBP3Q53F19 AL592295.1-201ENST00000400984 884 ntBASIC30.98■■■□□ 2.55
NCBP3Q53F19 DUX4L18-201ENST00000553347 1267 ntBASIC30.98■■■□□ 2.55
NCBP3Q53F19 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
NCBP3Q53F19 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.98■■■□□ 2.55
NCBP3Q53F19 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NCBP3Q53F19 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.97■■■□□ 2.55
NCBP3Q53F19 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
NCBP3Q53F19 AC022616.5-201ENST00000518796 181 ntBASIC30.97■■■□□ 2.55
NCBP3Q53F19 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NCBP3Q53F19 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCBP3Q53F19 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCBP3Q53F19 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NCBP3Q53F19 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NCBP3Q53F19 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NCBP3Q53F19 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
NCBP3Q53F19 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
NCBP3Q53F19 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
NCBP3Q53F19 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
NCBP3Q53F19 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NCBP3Q53F19 AP003733.4-201ENST00000623785 1697 ntBASIC30.94■■■□□ 2.54
NCBP3Q53F19 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
NCBP3Q53F19 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.94■■■□□ 2.54
NCBP3Q53F19 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NCBP3Q53F19 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
NCBP3Q53F19 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.93■■■□□ 2.54
NCBP3Q53F19 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NCBP3Q53F19 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NCBP3Q53F19 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NCBP3Q53F19 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.93■■■□□ 2.54
NCBP3Q53F19 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
NCBP3Q53F19 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
NCBP3Q53F19 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.91■■■□□ 2.54
NCBP3Q53F19 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.91■■■□□ 2.54
NCBP3Q53F19 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.91■■■□□ 2.54
NCBP3Q53F19 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
NCBP3Q53F19 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NCBP3Q53F19 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NCBP3Q53F19 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.91■■■□□ 2.54
NCBP3Q53F19 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.91■■■□□ 2.54
NCBP3Q53F19 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NCBP3Q53F19 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NCBP3Q53F19 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.9■■■□□ 2.54
NCBP3Q53F19 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NCBP3Q53F19 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.9■■■□□ 2.54
NCBP3Q53F19 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
NCBP3Q53F19 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.9■■■□□ 2.54
NCBP3Q53F19 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NCBP3Q53F19 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.9■■■□□ 2.54
NCBP3Q53F19 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.9■■■□□ 2.54
NCBP3Q53F19 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NCBP3Q53F19 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.89■■■□□ 2.54
NCBP3Q53F19 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NCBP3Q53F19 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NCBP3Q53F19 AC139795.1-202ENST00000500444 432 ntBASIC30.89■■■□□ 2.54
NCBP3Q53F19 PVT1_1.1-201ENST00000615125 194 ntBASIC30.89■■■□□ 2.54
NCBP3Q53F19 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NCBP3Q53F19 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
NCBP3Q53F19 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.88■■■□□ 2.53
NCBP3Q53F19 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
NCBP3Q53F19 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NCBP3Q53F19 AC012183.1-201ENST00000625197 499 ntBASIC30.88■■■□□ 2.53
NCBP3Q53F19 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NCBP3Q53F19 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NCBP3Q53F19 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
NCBP3Q53F19 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.87■■■□□ 2.53
NCBP3Q53F19 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NCBP3Q53F19 AL033527.3-201ENST00000566366 1196 ntBASIC30.87■■■□□ 2.53
NCBP3Q53F19 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
NCBP3Q53F19 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
NCBP3Q53F19 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.86■■■□□ 2.53
NCBP3Q53F19 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NCBP3Q53F19 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NCBP3Q53F19 AC138932.3-201ENST00000567634 1902 ntBASIC30.85■■■□□ 2.53
NCBP3Q53F19 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
NCBP3Q53F19 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
NCBP3Q53F19 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.85■■■□□ 2.53
NCBP3Q53F19 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.85■■■□□ 2.53
NCBP3Q53F19 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
NCBP3Q53F19 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.85■■■□□ 2.53
NCBP3Q53F19 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.84■■■□□ 2.53
NCBP3Q53F19 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.84■■■□□ 2.53
NCBP3Q53F19 MIR4508-201ENST00000584178 70 ntBASIC30.84■■■□□ 2.53
NCBP3Q53F19 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
NCBP3Q53F19 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NCBP3Q53F19 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
NCBP3Q53F19 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC30.83■■■□□ 2.53
NCBP3Q53F19 AC011551.1-201ENST00000614101 683 ntBASIC30.83■■■□□ 2.53
NCBP3Q53F19 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.83■■■□□ 2.53
NCBP3Q53F19 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NCBP3Q53F19 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NCBP3Q53F19 EED-207ENST00000528180 1745 ntTSL 5 BASIC30.82■■■□□ 2.52
NCBP3Q53F19 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
NCBP3Q53F19 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NCBP3Q53F19 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
NCBP3Q53F19 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
NCBP3Q53F19 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
NCBP3Q53F19 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NCBP3Q53F19 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.81■■■□□ 2.52
NCBP3Q53F19 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms