Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 TAE1YBR261C 699 nt6.88□□□□□ -1.31
UBP3Q01477 SGF29YCL010C 780 nt6.88□□□□□ -1.31 RIP-Chip
UBP3Q01477 CCC2YDR270W 3015 nt6.88□□□□□ -1.31
UBP3Q01477 BDF2YDL070W 1917 nt6.88□□□□□ -1.31
UBP3Q01477 GIP2YER054C 1647 nt6.87□□□□□ -1.31 RIP-Chip
UBP3Q01477 RSA4YCR072C 1548 nt6.87□□□□□ -1.31
UBP3Q01477 PTC3YBL056W 1407 nt6.87□□□□□ -1.31
UBP3Q01477 DXO1YDR370C 1329 nt6.87□□□□□ -1.31
UBP3Q01477 UIP5YKR044W 1332 nt6.87□□□□□ -1.31 RIP-Chip
UBP3Q01477 CUP2YGL166W 678 nt6.87□□□□□ -1.31
UBP3Q01477 OKP1YGR179C 1221 nt6.87□□□□□ -1.31
UBP3Q01477 NCE103YNL036W 666 nt6.87□□□□□ -1.31 RIP-Chip
UBP3Q01477 YOR169CYOR169C 465 nt6.87□□□□□ -1.31
UBP3Q01477 UBA3YPR066W 900 nt6.87□□□□□ -1.31
UBP3Q01477 OSW2YLR054C 2175 nt6.86□□□□□ -1.31
UBP3Q01477 YBR284WYBR284W 2394 nt6.86□□□□□ -1.31
UBP3Q01477 TCA17YEL048C 459 nt6.86□□□□□ -1.31
UBP3Q01477 YLL017WYLL017W 312 nt6.86□□□□□ -1.31
UBP3Q01477 ADD37YMR184W 597 nt6.86□□□□□ -1.31
UBP3Q01477 RUF23RUF23 254 nt6.86□□□□□ -1.31
UBP3Q01477 YPL136WYPL136W 369 nt6.86□□□□□ -1.31
UBP3Q01477 LDB16YCL005W 771 nt6.86□□□□□ -1.31
UBP3Q01477 ATR1YML116W 1629 nt6.86□□□□□ -1.31
UBP3Q01477 CDC1YDR182W 1476 nt6.85□□□□□ -1.31 RIP-Chip
UBP3Q01477 GCV1YDR019C 1203 nt6.85□□□□□ -1.31
UBP3Q01477 RPP1YHR062C 882 nt6.85□□□□□ -1.31
UBP3Q01477 MPC2YHR162W 390 nt6.85□□□□□ -1.31
UBP3Q01477 ECM9YKR004C 1134 nt6.85□□□□□ -1.31
UBP3Q01477 COX5AYNL052W 462 nt6.85□□□□□ -1.31
UBP3Q01477 MFA2YNL145W 117 nt6.85□□□□□ -1.31
UBP3Q01477 GLN3YER040W 2193 nt6.85□□□□□ -1.31
UBP3Q01477 LCB2YDR062W 1686 nt6.84□□□□□ -1.31 RIP-Chip
UBP3Q01477 LSM6YDR378C 261 nt6.84□□□□□ -1.31
UBP3Q01477 YLR123CYLR123C 330 nt6.84□□□□□ -1.31
UBP3Q01477 MAC1YMR021C 1254 nt6.84□□□□□ -1.31
UBP3Q01477 TOM40YMR203W 1164 nt6.84□□□□□ -1.31
UBP3Q01477 DCP1YOL149W 696 nt6.84□□□□□ -1.31
UBP3Q01477 PDB1YBR221C 1101 nt6.84□□□□□ -1.31
UBP3Q01477 UTR2YEL040W 1404 nt6.84□□□□□ -1.32
UBP3Q01477 HIS7YBR248C 1659 nt6.84□□□□□ -1.32
UBP3Q01477 GEX2YKR106W 1848 nt6.83□□□□□ -1.32
UBP3Q01477 YDL085C-AYDL085C-A 207 nt6.83□□□□□ -1.32 RIP-Chip
UBP3Q01477 YDR161WYDR161W 1164 nt6.83□□□□□ -1.32
UBP3Q01477 SUF5tG(CCC)O 72 nt6.83□□□□□ -1.32
UBP3Q01477 MSP1YGR028W 1089 nt6.83□□□□□ -1.32
UBP3Q01477 POR2YIL114C 846 nt6.83□□□□□ -1.32
UBP3Q01477 RPR2YIR015W 435 nt6.83□□□□□ -1.32
UBP3Q01477 ERG29YMR134W 714 nt6.83□□□□□ -1.32
UBP3Q01477 MER1YNL210W 813 nt6.83□□□□□ -1.32
UBP3Q01477 ECM31YBR176W 939 nt6.83□□□□□ -1.32
UBP3Q01477 POP1YNL221C 2628 nt6.83□□□□□ -1.32
UBP3Q01477 NFI1YOR156C 2181 nt6.82□□□□□ -1.32
UBP3Q01477 HXT3YDR345C 1704 nt6.82□□□□□ -1.32
UBP3Q01477 MRE11YMR224C 2079 nt6.82□□□□□ -1.32
UBP3Q01477 ECM14YHR132C 1293 nt6.82□□□□□ -1.32
UBP3Q01477 AIM24YJR080C 1185 nt6.82□□□□□ -1.32
UBP3Q01477 SUR7YML052W 909 nt6.82□□□□□ -1.32
UBP3Q01477 RCE1YMR274C 948 nt6.82□□□□□ -1.32
UBP3Q01477 YNL200CYNL200C 741 nt6.82□□□□□ -1.32
UBP3Q01477 RAD17YOR368W 1206 nt6.82□□□□□ -1.32 RIP-Chip
UBP3Q01477 SLM4YBR077C 489 nt6.82□□□□□ -1.32
UBP3Q01477 YPR109WYPR109W 885 nt6.82□□□□□ -1.32
UBP3Q01477 YMR279CYMR279C 1623 nt6.82□□□□□ -1.32
UBP3Q01477 SES1YDR023W 1389 nt6.82□□□□□ -1.32
UBP3Q01477 ARG81YML099C 2643 nt6.81□□□□□ -1.32 RIP-Chip
UBP3Q01477 ZWF1YNL241C 1518 nt6.81□□□□□ -1.32
UBP3Q01477 SLX5YDL013W 1860 nt6.81□□□□□ -1.32 RIP-Chip
UBP3Q01477 SNM1YDR478W 597 nt6.81□□□□□ -1.32
UBP3Q01477 SAW1YAL027W 786 nt6.81□□□□□ -1.32
UBP3Q01477 MEH1YKR007W 555 nt6.81□□□□□ -1.32 RIP-Chip
UBP3Q01477 DRE2YKR071C 1047 nt6.81□□□□□ -1.32
UBP3Q01477 YLR402WYLR402W 192 nt6.81□□□□□ -1.32
UBP3Q01477 YOR020W-AYOR020W-A 273 nt6.81□□□□□ -1.32
UBP3Q01477 RPT1YKL145W 1404 nt6.81□□□□□ -1.32
UBP3Q01477 ORC5YNL261W 1440 nt6.81□□□□□ -1.32
UBP3Q01477 HOS1YPR068C 1413 nt6.81□□□□□ -1.32
UBP3Q01477 ARP3YJR065C 1350 nt6.81□□□□□ -1.32
UBP3Q01477 KAR1YNL188W 1302 nt6.8□□□□□ -1.32
UBP3Q01477 YDR514CYDR514C 1452 nt6.8□□□□□ -1.32
UBP3Q01477 HXK2YGL253W 1461 nt6.8□□□□□ -1.32 RIP-Chip
UBP3Q01477 ENT5YDR153C 1236 nt6.8□□□□□ -1.32
UBP3Q01477 IPK1YDR315C 846 nt6.8□□□□□ -1.32
UBP3Q01477 CTF8YHR191C 402 nt6.8□□□□□ -1.32 RIP-Chip
UBP3Q01477 SPC34YKR037C 888 nt6.8□□□□□ -1.32
UBP3Q01477 GLC8YMR311C 690 nt6.8□□□□□ -1.32
UBP3Q01477 Q0017Q0017 162 nt6.8□□□□□ -1.32
UBP3Q01477 MAD3YJL013C 1548 nt6.8□□□□□ -1.32
UBP3Q01477 FAA4YMR246W 2085 nt6.8□□□□□ -1.32
UBP3Q01477 PEX3YDR329C 1326 nt6.79□□□□□ -1.32
UBP3Q01477 AVT4YNL101W 2142 nt6.79□□□□□ -1.32
UBP3Q01477 PHM8YER037W 966 nt6.79□□□□□ -1.32
UBP3Q01477 SPO74YGL170C 1242 nt6.79□□□□□ -1.32
UBP3Q01477 FMP48YGR052W 1110 nt6.79□□□□□ -1.32 RIP-Chip
UBP3Q01477 COX17YLL009C 210 nt6.79□□□□□ -1.32
UBP3Q01477 FPR3YML074C 1236 nt6.79□□□□□ -1.32
UBP3Q01477 YBL029WYBL029W 1131 nt6.79□□□□□ -1.32
UBP3Q01477 MTG1YMR097C 1104 nt6.79□□□□□ -1.32
UBP3Q01477 YMR122CYMR122C 375 nt6.79□□□□□ -1.32
UBP3Q01477 NOP13YNL175C 1212 nt6.79□□□□□ -1.32
UBP3Q01477 COQ3YOL096C 939 nt6.79□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms