Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKS1BP61024 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS1BP61024 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS1BP61024 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.28■□□□□ 0.2
CKS1BP61024 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS1BP61024 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.28■□□□□ 0.2
CKS1BP61024 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.28■□□□□ 0.2
CKS1BP61024 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.28■□□□□ 0.2
CKS1BP61024 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKS1BP61024 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CKS1BP61024 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.27■□□□□ 0.2
CKS1BP61024 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CKS1BP61024 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.27■□□□□ 0.2
CKS1BP61024 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CKS1BP61024 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CKS1BP61024 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CKS1BP61024 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CKS1BP61024 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CKS1BP61024 AC087741.3-201ENST00000624270 1347 ntBASIC16.26■□□□□ 0.19
CKS1BP61024 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKS1BP61024 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CKS1BP61024 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CKS1BP61024 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.26■□□□□ 0.19
CKS1BP61024 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CKS1BP61024 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.25■□□□□ 0.19
CKS1BP61024 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS1BP61024 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS1BP61024 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS1BP61024 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS1BP61024 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.25■□□□□ 0.19
CKS1BP61024 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CKS1BP61024 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKS1BP61024 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CKS1BP61024 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CKS1BP61024 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CKS1BP61024 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CKS1BP61024 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS1BP61024 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS1BP61024 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CKS1BP61024 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CKS1BP61024 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS1BP61024 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CKS1BP61024 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CKS1BP61024 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS1BP61024 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CKS1BP61024 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS1BP61024 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS1BP61024 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CKS1BP61024 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CKS1BP61024 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CKS1BP61024 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.23■□□□□ 0.19
CKS1BP61024 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CKS1BP61024 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.22■□□□□ 0.19
CKS1BP61024 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.22■□□□□ 0.19
CKS1BP61024 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.22■□□□□ 0.19
CKS1BP61024 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CKS1BP61024 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CKS1BP61024 AC010501.1-201ENST00000606270 1962 ntBASIC16.22■□□□□ 0.19
CKS1BP61024 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CKS1BP61024 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CKS1BP61024 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.21■□□□□ 0.19
CKS1BP61024 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS1BP61024 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS1BP61024 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CKS1BP61024 DUX4L29-201ENST00000425409 679 ntBASIC16.21■□□□□ 0.19
CKS1BP61024 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CKS1BP61024 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS1BP61024 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS1BP61024 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKS1BP61024 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CKS1BP61024 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CKS1BP61024 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS1BP61024 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS1BP61024 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS1BP61024 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS1BP61024 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS1BP61024 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CKS1BP61024 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS1BP61024 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms