Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAX9P55771 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PAX9P55771 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAX9P55771 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PAX9P55771 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.94■□□□□ 0.62
PAX9P55771 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.94■□□□□ 0.62
PAX9P55771 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.94■□□□□ 0.62
PAX9P55771 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 RPS2P35-201ENST00000443417 897 ntBASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L13-201ENST00000554103 1267 ntBASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L15-201ENST00000611059 1267 ntBASIC18.94■□□□□ 0.62
PAX9P55771 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L23-201ENST00000615195 1269 ntBASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L24-201ENST00000617576 1269 ntBASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L22-201ENST00000618238 1269 ntBASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L20-201ENST00000619712 1269 ntBASIC18.94■□□□□ 0.62
PAX9P55771 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L21-201ENST00000622058 1269 ntBASIC18.94■□□□□ 0.62
PAX9P55771 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L10-201ENST00000622460 1267 ntBASIC18.94■□□□□ 0.62
PAX9P55771 DUX4L25-201ENST00000624915 1269 ntBASIC18.94■□□□□ 0.62
PAX9P55771 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.94■□□□□ 0.62
PAX9P55771 C9orf163-202ENST00000624034 2573 ntBASIC18.94■□□□□ 0.62
PAX9P55771 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.94■□□□□ 0.62
PAX9P55771 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAX9P55771 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PAX9P55771 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PAX9P55771 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.93■□□□□ 0.62
PAX9P55771 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PAX9P55771 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.93■□□□□ 0.62
PAX9P55771 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.93■□□□□ 0.62
PAX9P55771 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PAX9P55771 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PAX9P55771 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.93■□□□□ 0.62
PAX9P55771 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PAX9P55771 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PAX9P55771 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PAX9P55771 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PAX9P55771 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.92■□□□□ 0.62
PAX9P55771 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.92■□□□□ 0.62
PAX9P55771 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
PAX9P55771 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.92■□□□□ 0.62
PAX9P55771 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PAX9P55771 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PAX9P55771 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PAX9P55771 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PAX9P55771 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.92■□□□□ 0.62
PAX9P55771 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 HLA-V-202ENST00000446817 847 ntBASIC18.91■□□□□ 0.62
PAX9P55771 LINC01971-201ENST00000617888 1048 ntBASIC18.91■□□□□ 0.62
PAX9P55771 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PAX9P55771 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAX9P55771 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.9■□□□□ 0.62
PAX9P55771 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAX9P55771 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAX9P55771 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PAX9P55771 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAX9P55771 MIR6089-201ENST00000616698 64 ntBASIC18.9■□□□□ 0.62
PAX9P55771 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAX9P55771 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PAX9P55771 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PAX9P55771 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.9■□□□□ 0.62
PAX9P55771 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.9■□□□□ 0.62
PAX9P55771 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.89■□□□□ 0.62
PAX9P55771 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.89■□□□□ 0.62
PAX9P55771 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.89■□□□□ 0.61
PAX9P55771 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX9P55771 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
PAX9P55771 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX9P55771 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.89■□□□□ 0.61
PAX9P55771 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX9P55771 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX9P55771 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX9P55771 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX9P55771 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PAX9P55771 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PAX9P55771 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PAX9P55771 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.88■□□□□ 0.61
PAX9P55771 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PAX9P55771 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
PAX9P55771 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PAX9P55771 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PAX9P55771 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PAX9P55771 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PAX9P55771 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PAX9P55771 CLDN5-201ENST00000403084 2357 ntBASIC18.87■□□□□ 0.61
PAX9P55771 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PAX9P55771 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms