Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDKN2DP55273 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.36■■□□□ 1.33
CDKN2DP55273 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDKN2DP55273 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.36■■□□□ 1.33
CDKN2DP55273 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.36■■□□□ 1.33
CDKN2DP55273 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDKN2DP55273 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDKN2DP55273 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.36■■□□□ 1.33
CDKN2DP55273 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDKN2DP55273 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CDKN2DP55273 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.35■■□□□ 1.33
CDKN2DP55273 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDKN2DP55273 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.35■■□□□ 1.33
CDKN2DP55273 AL592293.1-201ENST00000502889 1188 ntBASIC23.35■■□□□ 1.33
CDKN2DP55273 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.35■■□□□ 1.33
CDKN2DP55273 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDKN2DP55273 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDKN2DP55273 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CDKN2DP55273 LINC01124-201ENST00000409786 2117 ntBASIC23.34■■□□□ 1.33
CDKN2DP55273 SPCS2P3-201ENST00000500401 656 ntBASIC23.34■■□□□ 1.33
CDKN2DP55273 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDKN2DP55273 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDKN2DP55273 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.33■■□□□ 1.33
CDKN2DP55273 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDKN2DP55273 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.33■■□□□ 1.33
CDKN2DP55273 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CDKN2DP55273 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CDKN2DP55273 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDKN2DP55273 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDKN2DP55273 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.32■■□□□ 1.32
CDKN2DP55273 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDKN2DP55273 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDKN2DP55273 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.32■■□□□ 1.32
CDKN2DP55273 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.32■■□□□ 1.32
CDKN2DP55273 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDKN2DP55273 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDKN2DP55273 KRT18P10-201ENST00000388836 1287 ntBASIC23.31■■□□□ 1.32
CDKN2DP55273 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CDKN2DP55273 MIR6089-201ENST00000616698 64 ntBASIC23.31■■□□□ 1.32
CDKN2DP55273 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDKN2DP55273 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CDKN2DP55273 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CDKN2DP55273 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.3■■□□□ 1.32
CDKN2DP55273 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDKN2DP55273 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.3■■□□□ 1.32
CDKN2DP55273 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.3■■□□□ 1.32
CDKN2DP55273 FOXO3B-201ENST00000395675 1928 ntBASIC23.29■■□□□ 1.32
CDKN2DP55273 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.29■■□□□ 1.32
CDKN2DP55273 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
CDKN2DP55273 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKN2DP55273 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.29■■□□□ 1.32
CDKN2DP55273 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKN2DP55273 U85056.1-201ENST00000616429 682 ntBASIC23.29■■□□□ 1.32
CDKN2DP55273 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKN2DP55273 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKN2DP55273 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDKN2DP55273 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDKN2DP55273 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.28■■□□□ 1.32
CDKN2DP55273 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKN2DP55273 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CDKN2DP55273 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDKN2DP55273 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDKN2DP55273 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CDKN2DP55273 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.28■■□□□ 1.32
CDKN2DP55273 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CDKN2DP55273 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKN2DP55273 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDKN2DP55273 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.27■■□□□ 1.32
CDKN2DP55273 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKN2DP55273 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDKN2DP55273 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.27■■□□□ 1.31
CDKN2DP55273 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.26■■□□□ 1.31
CDKN2DP55273 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.26■■□□□ 1.31
CDKN2DP55273 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CDKN2DP55273 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CDKN2DP55273 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CDKN2DP55273 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDKN2DP55273 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDKN2DP55273 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDKN2DP55273 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
CDKN2DP55273 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.25■■□□□ 1.31
CDKN2DP55273 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.25■■□□□ 1.31
CDKN2DP55273 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDKN2DP55273 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.25■■□□□ 1.31
CDKN2DP55273 AC018755.3-202ENST00000596210 929 ntBASIC23.25■■□□□ 1.31
CDKN2DP55273 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKN2DP55273 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKN2DP55273 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKN2DP55273 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDKN2DP55273 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.24■■□□□ 1.31
CDKN2DP55273 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.24■■□□□ 1.31
CDKN2DP55273 RPS2P7-201ENST00000447334 885 ntBASIC23.24■■□□□ 1.31
CDKN2DP55273 DUX4L9-201ENST00000449051 1259 ntBASIC23.24■■□□□ 1.31
CDKN2DP55273 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKN2DP55273 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKN2DP55273 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKN2DP55273 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.24■■□□□ 1.31
CDKN2DP55273 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKN2DP55273 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKN2DP55273 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms