Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.8■■□□□ 1.4
HADHAP40939 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HADHAP40939 AP003733.4-201ENST00000623785 1697 ntBASIC23.79■■□□□ 1.4
HADHAP40939 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HADHAP40939 SPCS2P3-201ENST00000500401 656 ntBASIC23.79■■□□□ 1.4
HADHAP40939 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.79■■□□□ 1.4
HADHAP40939 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HADHAP40939 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.79■■□□□ 1.4
HADHAP40939 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HADHAP40939 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HADHAP40939 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HADHAP40939 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HADHAP40939 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HADHAP40939 DUX4L9-201ENST00000449051 1259 ntBASIC23.78■■□□□ 1.4
HADHAP40939 MIR6765-201ENST00000614092 87 ntBASIC23.78■■□□□ 1.4
HADHAP40939 AC129492.7-201ENST00000622992 756 ntBASIC23.78■■□□□ 1.4
HADHAP40939 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HADHAP40939 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
HADHAP40939 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HADHAP40939 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HADHAP40939 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.77■■□□□ 1.4
HADHAP40939 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HADHAP40939 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
HADHAP40939 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.76■■□□□ 1.39
HADHAP40939 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HADHAP40939 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HADHAP40939 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HADHAP40939 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.76■■□□□ 1.39
HADHAP40939 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HADHAP40939 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
HADHAP40939 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HADHAP40939 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.75■■□□□ 1.39
HADHAP40939 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HADHAP40939 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
HADHAP40939 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HADHAP40939 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
HADHAP40939 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
HADHAP40939 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HADHAP40939 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.74■■□□□ 1.39
HADHAP40939 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HADHAP40939 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.74■■□□□ 1.39
HADHAP40939 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.74■■□□□ 1.39
HADHAP40939 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HADHAP40939 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.74■■□□□ 1.39
HADHAP40939 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
HADHAP40939 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HADHAP40939 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HADHAP40939 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HADHAP40939 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.72■■□□□ 1.39
HADHAP40939 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
HADHAP40939 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
HADHAP40939 RPS2P7-201ENST00000447334 885 ntBASIC23.72■■□□□ 1.39
HADHAP40939 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HADHAP40939 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HADHAP40939 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HADHAP40939 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.71■■□□□ 1.39
HADHAP40939 SLC6A10P-202ENST00000431994 2058 ntBASIC23.71■■□□□ 1.39
HADHAP40939 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HADHAP40939 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
HADHAP40939 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.71■■□□□ 1.39
HADHAP40939 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HADHAP40939 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HADHAP40939 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HADHAP40939 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.71■■□□□ 1.39
HADHAP40939 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
HADHAP40939 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HADHAP40939 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.7■■□□□ 1.38
HADHAP40939 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
HADHAP40939 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HADHAP40939 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
HADHAP40939 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.7■■□□□ 1.38
HADHAP40939 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
HADHAP40939 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HADHAP40939 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
HADHAP40939 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HADHAP40939 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
HADHAP40939 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HADHAP40939 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.69■■□□□ 1.38
HADHAP40939 AC087393.1-201ENST00000582896 145 ntBASIC23.69■■□□□ 1.38
HADHAP40939 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
HADHAP40939 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
HADHAP40939 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HADHAP40939 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HADHAP40939 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
HADHAP40939 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HADHAP40939 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
HADHAP40939 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HADHAP40939 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.67■■□□□ 1.38
HADHAP40939 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HADHAP40939 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HADHAP40939 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.67■■□□□ 1.38
HADHAP40939 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
HADHAP40939 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HADHAP40939 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
HADHAP40939 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.66■■□□□ 1.38
HADHAP40939 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HADHAP40939 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
HADHAP40939 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HADHAP40939 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HADHAP40939 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms