Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCNN1AP37088 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCNN1AP37088 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCNN1AP37088 AL592295.1-201ENST00000400984 884 ntBASIC24.73■■□□□ 1.55
SCNN1AP37088 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.73■■□□□ 1.55
SCNN1AP37088 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.73■■□□□ 1.55
SCNN1AP37088 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCNN1AP37088 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCNN1AP37088 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCNN1AP37088 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCNN1AP37088 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SCNN1AP37088 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.72■■□□□ 1.55
SCNN1AP37088 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.72■■□□□ 1.55
SCNN1AP37088 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCNN1AP37088 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
SCNN1AP37088 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.71■■□□□ 1.55
SCNN1AP37088 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.71■■□□□ 1.55
SCNN1AP37088 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCNN1AP37088 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.7■■□□□ 1.54
SCNN1AP37088 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCNN1AP37088 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.7■■□□□ 1.54
SCNN1AP37088 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.7■■□□□ 1.54
SCNN1AP37088 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.7■■□□□ 1.54
SCNN1AP37088 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCNN1AP37088 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
SCNN1AP37088 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCNN1AP37088 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCNN1AP37088 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCNN1AP37088 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCNN1AP37088 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCNN1AP37088 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCNN1AP37088 AL033527.3-201ENST00000566366 1196 ntBASIC24.69■■□□□ 1.54
SCNN1AP37088 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
SCNN1AP37088 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.69■■□□□ 1.54
SCNN1AP37088 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.69■■□□□ 1.54
SCNN1AP37088 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCNN1AP37088 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SCNN1AP37088 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCNN1AP37088 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SCNN1AP37088 AC022616.5-201ENST00000518796 181 ntBASIC24.68■■□□□ 1.54
SCNN1AP37088 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCNN1AP37088 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCNN1AP37088 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.68■■□□□ 1.54
SCNN1AP37088 AP003733.4-201ENST00000623785 1697 ntBASIC24.68■■□□□ 1.54
SCNN1AP37088 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCNN1AP37088 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCNN1AP37088 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.67■■□□□ 1.54
SCNN1AP37088 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCNN1AP37088 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SCNN1AP37088 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCNN1AP37088 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCNN1AP37088 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.67■■□□□ 1.54
SCNN1AP37088 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.67■■□□□ 1.54
SCNN1AP37088 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCNN1AP37088 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCNN1AP37088 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.66■■□□□ 1.54
SCNN1AP37088 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCNN1AP37088 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
SCNN1AP37088 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
SCNN1AP37088 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.66■■□□□ 1.54
SCNN1AP37088 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SCNN1AP37088 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.66■■□□□ 1.54
SCNN1AP37088 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCNN1AP37088 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.66■■□□□ 1.54
SCNN1AP37088 BHLHE23-202ENST00000612929 1109 ntBASIC24.66■■□□□ 1.54
SCNN1AP37088 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCNN1AP37088 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCNN1AP37088 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCNN1AP37088 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCNN1AP37088 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.65■■□□□ 1.54
SCNN1AP37088 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SCNN1AP37088 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.65■■□□□ 1.54
SCNN1AP37088 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.65■■□□□ 1.54
SCNN1AP37088 AC138932.3-201ENST00000567634 1902 ntBASIC24.65■■□□□ 1.54
SCNN1AP37088 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.64■■□□□ 1.54
SCNN1AP37088 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.64■■□□□ 1.54
SCNN1AP37088 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
SCNN1AP37088 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
SCNN1AP37088 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SCNN1AP37088 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCNN1AP37088 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.63■■□□□ 1.53
SCNN1AP37088 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCNN1AP37088 PVT1_1.1-201ENST00000615125 194 ntBASIC24.63■■□□□ 1.53
SCNN1AP37088 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SCNN1AP37088 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.62■■□□□ 1.53
SCNN1AP37088 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SCNN1AP37088 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCNN1AP37088 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCNN1AP37088 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.61■■□□□ 1.53
SCNN1AP37088 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCNN1AP37088 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.61■■□□□ 1.53
SCNN1AP37088 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SCNN1AP37088 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.61■■□□□ 1.53
SCNN1AP37088 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.61■■□□□ 1.53
SCNN1AP37088 AC010980.1-201ENST00000587192 1142 ntBASIC24.61■■□□□ 1.53
SCNN1AP37088 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.61■■□□□ 1.53
SCNN1AP37088 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCNN1AP37088 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCNN1AP37088 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCNN1AP37088 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms