Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PDE6BP35913 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PDE6BP35913 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.55■■■□□ 2.32
PDE6BP35913 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PDE6BP35913 RARRES2P6-201ENST00000567333 442 ntBASIC29.54■■■□□ 2.32
PDE6BP35913 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC29.54■■■□□ 2.32
PDE6BP35913 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.53■■■□□ 2.32
PDE6BP35913 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.53■■■□□ 2.32
PDE6BP35913 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PDE6BP35913 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.53■■■□□ 2.32
PDE6BP35913 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PDE6BP35913 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PDE6BP35913 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PDE6BP35913 AC142381.2-201ENST00000566120 298 ntBASIC29.52■■■□□ 2.32
PDE6BP35913 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PDE6BP35913 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
PDE6BP35913 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PDE6BP35913 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.51■■■□□ 2.31
PDE6BP35913 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.51■■■□□ 2.31
PDE6BP35913 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.51■■■□□ 2.31
PDE6BP35913 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.51■■■□□ 2.31
PDE6BP35913 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
PDE6BP35913 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PDE6BP35913 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.5■■■□□ 2.31
PDE6BP35913 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PDE6BP35913 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.49■■■□□ 2.31
PDE6BP35913 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.49■■■□□ 2.31
PDE6BP35913 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PDE6BP35913 AC092666.2-201ENST00000613287 246 ntBASIC29.49■■■□□ 2.31
PDE6BP35913 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PDE6BP35913 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
PDE6BP35913 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PDE6BP35913 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
PDE6BP35913 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.48■■■□□ 2.31
PDE6BP35913 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PDE6BP35913 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.48■■■□□ 2.31
PDE6BP35913 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PDE6BP35913 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PDE6BP35913 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PDE6BP35913 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
PDE6BP35913 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PDE6BP35913 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
PDE6BP35913 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PDE6BP35913 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PDE6BP35913 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.46■■■□□ 2.31
PDE6BP35913 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC29.46■■■□□ 2.31
PDE6BP35913 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.46■■■□□ 2.31
PDE6BP35913 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
PDE6BP35913 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
PDE6BP35913 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
PDE6BP35913 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
PDE6BP35913 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PDE6BP35913 UNC93B3-201ENST00000308076 687 ntBASIC29.45■■■□□ 2.31
PDE6BP35913 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.45■■■□□ 2.31
PDE6BP35913 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PDE6BP35913 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
PDE6BP35913 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
PDE6BP35913 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PDE6BP35913 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
PDE6BP35913 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.44■■■□□ 2.3
PDE6BP35913 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.44■■■□□ 2.3
PDE6BP35913 MIR6722-201ENST00000617286 78 ntBASIC29.44■■■□□ 2.3
PDE6BP35913 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.44■■■□□ 2.3
PDE6BP35913 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PDE6BP35913 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PDE6BP35913 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PDE6BP35913 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PDE6BP35913 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
PDE6BP35913 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PDE6BP35913 SUDS3P1-201ENST00000505831 966 ntBASIC29.43■■■□□ 2.3
PDE6BP35913 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PDE6BP35913 AC026271.2-201ENST00000428091 497 ntBASIC29.42■■■□□ 2.3
PDE6BP35913 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.42■■■□□ 2.3
PDE6BP35913 SNX5-217ENST00000606557 1087 ntBASIC29.42■■■□□ 2.3
PDE6BP35913 AL031432.3-201ENST00000607698 485 ntBASIC29.42■■■□□ 2.3
PDE6BP35913 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.42■■■□□ 2.3
PDE6BP35913 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
PDE6BP35913 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.42■■■□□ 2.3
PDE6BP35913 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.41■■■□□ 2.3
PDE6BP35913 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
PDE6BP35913 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
PDE6BP35913 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.41■■■□□ 2.3
PDE6BP35913 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PDE6BP35913 AL136162.1-201ENST00000607711 1078 ntBASIC29.41■■■□□ 2.3
PDE6BP35913 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.41■■■□□ 2.3
PDE6BP35913 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
PDE6BP35913 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
PDE6BP35913 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PDE6BP35913 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PDE6BP35913 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PDE6BP35913 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PDE6BP35913 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.39■■■□□ 2.3
PDE6BP35913 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.39■■■□□ 2.3
PDE6BP35913 AC135279.3-201ENST00000610945 1311 ntBASIC29.39■■■□□ 2.3
PDE6BP35913 FOXO3B-201ENST00000395675 1928 ntBASIC29.38■■■□□ 2.29
PDE6BP35913 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
PDE6BP35913 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PDE6BP35913 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.38■■■□□ 2.29
PDE6BP35913 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
PDE6BP35913 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms