Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC142381.3-201ENST00000568208 1670 ntBASIC19.47■□□□□ 0.71
ATF4P18848 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATF4P18848 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF4P18848 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ATF4P18848 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ATF4P18848 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.47■□□□□ 0.71
ATF4P18848 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATF4P18848 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATF4P18848 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATF4P18848 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATF4P18848 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
ATF4P18848 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATF4P18848 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATF4P18848 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATF4P18848 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
ATF4P18848 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.45■□□□□ 0.7
ATF4P18848 AC100797.4-201ENST00000631653 1827 ntBASIC19.45■□□□□ 0.7
ATF4P18848 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATF4P18848 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF4P18848 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ATF4P18848 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF4P18848 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF4P18848 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.44■□□□□ 0.7
ATF4P18848 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF4P18848 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF4P18848 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ATF4P18848 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ATF4P18848 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATF4P18848 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATF4P18848 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF4P18848 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF4P18848 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF4P18848 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF4P18848 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF4P18848 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF4P18848 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATF4P18848 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATF4P18848 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.42■□□□□ 0.7
ATF4P18848 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ATF4P18848 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF4P18848 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF4P18848 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF4P18848 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATF4P18848 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
ATF4P18848 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF4P18848 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATF4P18848 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATF4P18848 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATF4P18848 DUSP8P5-201ENST00000422884 1815 ntBASIC19.41■□□□□ 0.7
ATF4P18848 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.41■□□□□ 0.7
ATF4P18848 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATF4P18848 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATF4P18848 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATF4P18848 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATF4P18848 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATF4P18848 ABHD17AP4-201ENST00000411545 909 ntBASIC19.41■□□□□ 0.7
ATF4P18848 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.41■□□□□ 0.7
ATF4P18848 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATF4P18848 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.41■□□□□ 0.7
ATF4P18848 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATF4P18848 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATF4P18848 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.4■□□□□ 0.7
ATF4P18848 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATF4P18848 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATF4P18848 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATF4P18848 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATF4P18848 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATF4P18848 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATF4P18848 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
ATF4P18848 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATF4P18848 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATF4P18848 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
ATF4P18848 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ATF4P18848 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF4P18848 AC108673.1-201ENST00000510422 1159 ntBASIC19.39■□□□□ 0.69
ATF4P18848 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF4P18848 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF4P18848 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF4P18848 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATF4P18848 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATF4P18848 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF4P18848 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF4P18848 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF4P18848 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF4P18848 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF4P18848 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF4P18848 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATF4P18848 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.38■□□□□ 0.69
ATF4P18848 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.38■□□□□ 0.69
ATF4P18848 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATF4P18848 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATF4P18848 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATF4P18848 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms