Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
PF4V1P10720 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PF4V1P10720 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.62■□□□□ 0.57
PF4V1P10720 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.62■□□□□ 0.57
PF4V1P10720 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PF4V1P10720 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PF4V1P10720 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PF4V1P10720 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PF4V1P10720 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PF4V1P10720 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.62■□□□□ 0.57
PF4V1P10720 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PF4V1P10720 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PF4V1P10720 DUSP8P4-201ENST00000399538 1761 ntBASIC18.61■□□□□ 0.57
PF4V1P10720 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PF4V1P10720 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PF4V1P10720 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
PF4V1P10720 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PF4V1P10720 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.61■□□□□ 0.57
PF4V1P10720 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.61■□□□□ 0.57
PF4V1P10720 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.61■□□□□ 0.57
PF4V1P10720 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.61■□□□□ 0.57
PF4V1P10720 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PF4V1P10720 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PF4V1P10720 GUSBP5-201ENST00000418136 578 ntBASIC18.6■□□□□ 0.57
PF4V1P10720 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.6■□□□□ 0.57
PF4V1P10720 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PF4V1P10720 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PF4V1P10720 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PF4V1P10720 AC097639.1-201ENST00000565519 1891 ntBASIC18.59■□□□□ 0.57
PF4V1P10720 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PF4V1P10720 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PF4V1P10720 LONRF2P2-201ENST00000439212 571 ntBASIC18.59■□□□□ 0.57
PF4V1P10720 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PF4V1P10720 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.59■□□□□ 0.57
PF4V1P10720 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.59■□□□□ 0.57
PF4V1P10720 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PF4V1P10720 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PF4V1P10720 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PF4V1P10720 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PF4V1P10720 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PF4V1P10720 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
PF4V1P10720 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PF4V1P10720 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PF4V1P10720 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.58■□□□□ 0.56
PF4V1P10720 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PF4V1P10720 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
PF4V1P10720 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PF4V1P10720 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PF4V1P10720 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PF4V1P10720 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.57■□□□□ 0.56
PF4V1P10720 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.57■□□□□ 0.56
PF4V1P10720 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.57■□□□□ 0.56
PF4V1P10720 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.57■□□□□ 0.56
PF4V1P10720 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PF4V1P10720 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PF4V1P10720 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PF4V1P10720 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PF4V1P10720 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PF4V1P10720 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PF4V1P10720 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PF4V1P10720 AC239859.2-201ENST00000444165 318 ntBASIC18.56■□□□□ 0.56
PF4V1P10720 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PF4V1P10720 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PF4V1P10720 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.55■□□□□ 0.56
PF4V1P10720 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.55■□□□□ 0.56
PF4V1P10720 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PF4V1P10720 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.55■□□□□ 0.56
PF4V1P10720 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.55■□□□□ 0.56
PF4V1P10720 AC022616.5-201ENST00000518796 181 ntBASIC18.55■□□□□ 0.56
PF4V1P10720 THA1P-201ENST00000590384 1145 ntBASIC18.55■□□□□ 0.56
PF4V1P10720 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.55■□□□□ 0.56
PF4V1P10720 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PF4V1P10720 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PF4V1P10720 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PF4V1P10720 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.54■□□□□ 0.56
PF4V1P10720 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PF4V1P10720 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PF4V1P10720 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PF4V1P10720 KRT125P-201ENST00000546827 989 ntBASIC18.54■□□□□ 0.56
PF4V1P10720 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PF4V1P10720 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PF4V1P10720 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
PF4V1P10720 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PF4V1P10720 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PF4V1P10720 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PF4V1P10720 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PF4V1P10720 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.53■□□□□ 0.56
PF4V1P10720 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PF4V1P10720 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PF4V1P10720 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.53■□□□□ 0.56
PF4V1P10720 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PF4V1P10720 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PF4V1P10720 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms