Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM18P0DKX4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMIM18P0DKX4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.07
SMIM18P0DKX4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.7■■□□□ 1.07
SMIM18P0DKX4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
SMIM18P0DKX4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM18P0DKX4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM18P0DKX4 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.7■■□□□ 1.06
SMIM18P0DKX4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM18P0DKX4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMIM18P0DKX4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.7■■□□□ 1.06
SMIM18P0DKX4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 LINC00526-201ENST00000581067 1875 ntBASIC21.69■■□□□ 1.06
SMIM18P0DKX4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMIM18P0DKX4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM18P0DKX4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMIM18P0DKX4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.68■■□□□ 1.06
SMIM18P0DKX4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMIM18P0DKX4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SMIM18P0DKX4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMIM18P0DKX4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.67■■□□□ 1.06
SMIM18P0DKX4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMIM18P0DKX4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM18P0DKX4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM18P0DKX4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.65■■□□□ 1.06
SMIM18P0DKX4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SMIM18P0DKX4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMIM18P0DKX4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.65■■□□□ 1.06
SMIM18P0DKX4 LINC00273-201ENST00000539813 1452 ntBASIC21.64■■□□□ 1.06
SMIM18P0DKX4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMIM18P0DKX4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMIM18P0DKX4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM18P0DKX4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM18P0DKX4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SMIM18P0DKX4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM18P0DKX4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.64■■□□□ 1.05
SMIM18P0DKX4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMIM18P0DKX4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM18P0DKX4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SMIM18P0DKX4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.63■■□□□ 1.05
SMIM18P0DKX4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.63■■□□□ 1.05
SMIM18P0DKX4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.63■■□□□ 1.05
SMIM18P0DKX4 AC127496.7-201ENST00000625110 1798 ntBASIC21.63■■□□□ 1.05
SMIM18P0DKX4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMIM18P0DKX4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SMIM18P0DKX4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM18P0DKX4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM18P0DKX4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM18P0DKX4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM18P0DKX4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM18P0DKX4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMIM18P0DKX4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMIM18P0DKX4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.6■■□□□ 1.05
SMIM18P0DKX4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM18P0DKX4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM18P0DKX4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM18P0DKX4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMIM18P0DKX4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.6■■□□□ 1.05
SMIM18P0DKX4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SMIM18P0DKX4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM18P0DKX4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM18P0DKX4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMIM18P0DKX4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.59■■□□□ 1.05
SMIM18P0DKX4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SMIM18P0DKX4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms