Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SNRPA1P09661 FOXO3B-201ENST00000395675 1928 ntBASIC30.45■■■□□ 2.47
SNRPA1P09661 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.45■■■□□ 2.47
SNRPA1P09661 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
SNRPA1P09661 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.45■■■□□ 2.47
SNRPA1P09661 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.45■■■□□ 2.46
SNRPA1P09661 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SNRPA1P09661 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SNRPA1P09661 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
SNRPA1P09661 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.43■■■□□ 2.46
SNRPA1P09661 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
SNRPA1P09661 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.43■■■□□ 2.46
SNRPA1P09661 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SNRPA1P09661 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SNRPA1P09661 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNRPA1P09661 ERN1-208ENST00000606895 2068 ntBASIC30.42■■■□□ 2.46
SNRPA1P09661 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNRPA1P09661 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SNRPA1P09661 AC096887.2-201ENST00000623443 1957 ntBASIC30.42■■■□□ 2.46
SNRPA1P09661 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SNRPA1P09661 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNRPA1P09661 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SNRPA1P09661 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.41■■■□□ 2.46
SNRPA1P09661 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SNRPA1P09661 AC008406.3-201ENST00000620001 1374 ntBASIC30.41■■■□□ 2.46
SNRPA1P09661 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.4■■■□□ 2.46
SNRPA1P09661 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.4■■■□□ 2.46
SNRPA1P09661 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.4■■■□□ 2.46
SNRPA1P09661 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.39■■■□□ 2.46
SNRPA1P09661 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SNRPA1P09661 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.39■■■□□ 2.46
SNRPA1P09661 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SNRPA1P09661 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
SNRPA1P09661 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNRPA1P09661 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SNRPA1P09661 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
SNRPA1P09661 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
SNRPA1P09661 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.37■■■□□ 2.45
SNRPA1P09661 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNRPA1P09661 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
SNRPA1P09661 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.36■■■□□ 2.45
SNRPA1P09661 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SNRPA1P09661 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNRPA1P09661 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
SNRPA1P09661 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SNRPA1P09661 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNRPA1P09661 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNRPA1P09661 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNRPA1P09661 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SNRPA1P09661 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.35■■■□□ 2.45
SNRPA1P09661 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.35■■■□□ 2.45
SNRPA1P09661 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.35■■■□□ 2.45
SNRPA1P09661 AF131216.4-201ENST00000638924 1588 ntBASIC30.35■■■□□ 2.45
SNRPA1P09661 AC097639.1-201ENST00000565519 1891 ntBASIC30.35■■■□□ 2.45
SNRPA1P09661 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.34■■■□□ 2.45
SNRPA1P09661 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.34■■■□□ 2.45
SNRPA1P09661 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNRPA1P09661 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SNRPA1P09661 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.34■■■□□ 2.45
SNRPA1P09661 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNRPA1P09661 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNRPA1P09661 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
SNRPA1P09661 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SNRPA1P09661 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SNRPA1P09661 AC010997.5-201ENST00000609182 354 ntBASIC30.33■■■□□ 2.45
SNRPA1P09661 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.33■■■□□ 2.45
SNRPA1P09661 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNRPA1P09661 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.33■■■□□ 2.45
SNRPA1P09661 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SNRPA1P09661 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.32■■■□□ 2.44
SNRPA1P09661 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
SNRPA1P09661 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.31■■■□□ 2.44
SNRPA1P09661 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.31■■■□□ 2.44
SNRPA1P09661 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.31■■■□□ 2.44
SNRPA1P09661 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.31■■■□□ 2.44
SNRPA1P09661 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.31■■■□□ 2.44
SNRPA1P09661 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.31■■■□□ 2.44
SNRPA1P09661 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.31■■■□□ 2.44
SNRPA1P09661 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNRPA1P09661 AC010501.1-201ENST00000606270 1962 ntBASIC30.3■■■□□ 2.44
SNRPA1P09661 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SNRPA1P09661 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNRPA1P09661 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.3■■■□□ 2.44
SNRPA1P09661 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNRPA1P09661 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNRPA1P09661 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.29■■■□□ 2.44
SNRPA1P09661 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.29■■■□□ 2.44
SNRPA1P09661 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SNRPA1P09661 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.29■■■□□ 2.44
SNRPA1P09661 AC019069.1-201ENST00000610008 1333 ntBASIC30.28■■■□□ 2.44
SNRPA1P09661 MTDHP2-201ENST00000601468 714 ntBASIC30.28■■■□□ 2.44
SNRPA1P09661 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.28■■■□□ 2.44
SNRPA1P09661 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.28■■■□□ 2.44
SNRPA1P09661 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SNRPA1P09661 AC090877.2-201ENST00000558441 1738 ntBASIC30.27■■■□□ 2.44
SNRPA1P09661 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.27■■■□□ 2.44
SNRPA1P09661 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SNRPA1P09661 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.27■■■□□ 2.44
SNRPA1P09661 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SNRPA1P09661 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms