Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.09■□□□□ 0.97
MRPL3P09001 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MRPL3P09001 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.09■□□□□ 0.97
MRPL3P09001 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MRPL3P09001 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
MRPL3P09001 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
MRPL3P09001 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MRPL3P09001 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MRPL3P09001 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MRPL3P09001 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.08■□□□□ 0.97
MRPL3P09001 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MRPL3P09001 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MRPL3P09001 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MRPL3P09001 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MRPL3P09001 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MRPL3P09001 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.08■□□□□ 0.97
MRPL3P09001 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MRPL3P09001 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
MRPL3P09001 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
MRPL3P09001 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MRPL3P09001 LINC00543-201ENST00000567234 1845 ntBASIC21.07■□□□□ 0.96
MRPL3P09001 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.07■□□□□ 0.96
MRPL3P09001 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.07■□□□□ 0.96
MRPL3P09001 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
MRPL3P09001 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.07■□□□□ 0.96
MRPL3P09001 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MRPL3P09001 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MRPL3P09001 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MRPL3P09001 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.06■□□□□ 0.96
MRPL3P09001 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL3P09001 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL3P09001 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL3P09001 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL3P09001 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
MRPL3P09001 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL3P09001 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
MRPL3P09001 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL3P09001 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MRPL3P09001 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRPL3P09001 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRPL3P09001 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
MRPL3P09001 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MRPL3P09001 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRPL3P09001 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.05■□□□□ 0.96
MRPL3P09001 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MRPL3P09001 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRPL3P09001 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MRPL3P09001 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL3P09001 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.04■□□□□ 0.96
MRPL3P09001 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.04■□□□□ 0.96
MRPL3P09001 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL3P09001 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.04■□□□□ 0.96
MRPL3P09001 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL3P09001 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
MRPL3P09001 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL3P09001 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL3P09001 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MRPL3P09001 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.04■□□□□ 0.96
MRPL3P09001 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRPL3P09001 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MRPL3P09001 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRPL3P09001 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.03■□□□□ 0.96
MRPL3P09001 AC025884.2-201ENST00000553429 711 ntBASIC21.03■□□□□ 0.96
MRPL3P09001 AC133561.1-201ENST00000568600 2415 ntBASIC21.03■□□□□ 0.96
MRPL3P09001 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL3P09001 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL3P09001 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL3P09001 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL3P09001 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL3P09001 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL3P09001 AC060814.1-201ENST00000554326 538 ntBASIC21.02■□□□□ 0.96
MRPL3P09001 MIR3960-201ENST00000583311 91 ntBASIC21.02■□□□□ 0.96
MRPL3P09001 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL3P09001 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MRPL3P09001 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.01■□□□□ 0.95
MRPL3P09001 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL3P09001 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
MRPL3P09001 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MRPL3P09001 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.01■□□□□ 0.95
MRPL3P09001 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL3P09001 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.01■□□□□ 0.95
MRPL3P09001 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL3P09001 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
MRPL3P09001 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
MRPL3P09001 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MRPL3P09001 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21■□□□□ 0.95
MRPL3P09001 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21■□□□□ 0.95
MRPL3P09001 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MRPL3P09001 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPL3P09001 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRPL3P09001 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms