Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.2■■□□□ 1.79
COL1A2P08123 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL1A2P08123 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.2■■□□□ 1.79
COL1A2P08123 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL1A2P08123 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.2■■□□□ 1.78
COL1A2P08123 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
COL1A2P08123 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.2■■□□□ 1.78
COL1A2P08123 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
COL1A2P08123 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL1A2P08123 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.2■■□□□ 1.78
COL1A2P08123 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A2P08123 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A2P08123 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A2P08123 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL1A2P08123 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.19■■□□□ 1.78
COL1A2P08123 AC092803.2-201ENST00000564287 1899 ntBASIC26.19■■□□□ 1.78
COL1A2P08123 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.19■■□□□ 1.78
COL1A2P08123 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.18■■□□□ 1.78
COL1A2P08123 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A2P08123 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A2P08123 UNC93B8-201ENST00000511903 705 ntBASIC26.18■■□□□ 1.78
COL1A2P08123 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.18■■□□□ 1.78
COL1A2P08123 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.18■■□□□ 1.78
COL1A2P08123 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL1A2P08123 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A2P08123 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
COL1A2P08123 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A2P08123 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A2P08123 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL1A2P08123 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.17■■□□□ 1.78
COL1A2P08123 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL1A2P08123 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
COL1A2P08123 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A2P08123 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A2P08123 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A2P08123 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.16■■□□□ 1.78
COL1A2P08123 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.16■■□□□ 1.78
COL1A2P08123 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A2P08123 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL1A2P08123 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.15■■□□□ 1.78
COL1A2P08123 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL1A2P08123 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.15■■□□□ 1.78
COL1A2P08123 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.15■■□□□ 1.78
COL1A2P08123 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.15■■□□□ 1.78
COL1A2P08123 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL1A2P08123 AC092028.1-203ENST00000608262 953 ntBASIC26.15■■□□□ 1.78
COL1A2P08123 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.15■■□□□ 1.78
COL1A2P08123 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
COL1A2P08123 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.78
COL1A2P08123 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.14■■□□□ 1.78
COL1A2P08123 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL1A2P08123 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL1A2P08123 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A2P08123 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A2P08123 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.13■■□□□ 1.77
COL1A2P08123 KRT16P3-201ENST00000439127 1283 ntBASIC26.13■■□□□ 1.77
COL1A2P08123 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.13■■□□□ 1.77
COL1A2P08123 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.12■■□□□ 1.77
COL1A2P08123 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL1A2P08123 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.12■■□□□ 1.77
COL1A2P08123 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.12■■□□□ 1.77
COL1A2P08123 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL1A2P08123 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.11■■□□□ 1.77
COL1A2P08123 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A2P08123 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
COL1A2P08123 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A2P08123 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
COL1A2P08123 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.1■■□□□ 1.77
COL1A2P08123 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A2P08123 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.1■■□□□ 1.77
COL1A2P08123 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A2P08123 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A2P08123 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A2P08123 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.09■■□□□ 1.77
COL1A2P08123 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
COL1A2P08123 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.09■■□□□ 1.77
COL1A2P08123 AC090877.2-201ENST00000558441 1738 ntBASIC26.09■■□□□ 1.77
COL1A2P08123 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.09■■□□□ 1.77
COL1A2P08123 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A2P08123 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.08■■□□□ 1.77
COL1A2P08123 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.08■■□□□ 1.77
COL1A2P08123 TSPY9P-201ENST00000440215 945 ntBASIC26.08■■□□□ 1.77
COL1A2P08123 TSPY11P-201ENST00000442607 1045 ntBASIC26.08■■□□□ 1.77
COL1A2P08123 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
COL1A2P08123 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL1A2P08123 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
COL1A2P08123 AF131216.4-201ENST00000638924 1588 ntBASIC26.08■■□□□ 1.77
COL1A2P08123 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.76
COL1A2P08123 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL1A2P08123 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL1A2P08123 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL1A2P08123 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
COL1A2P08123 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
COL1A2P08123 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.07■■□□□ 1.76
COL1A2P08123 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A2P08123 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL1A2P08123 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.06■■□□□ 1.76
COL1A2P08123 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
COL1A2P08123 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.06■■□□□ 1.76
COL1A2P08123 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms