Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NEFMP07197 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
NEFMP07197 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NEFMP07197 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NEFMP07197 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
NEFMP07197 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NEFMP07197 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NEFMP07197 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NEFMP07197 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NEFMP07197 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.38■■■□□ 2.61
NEFMP07197 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NEFMP07197 AC103724.3-201ENST00000564481 992 ntBASIC31.37■■■□□ 2.61
NEFMP07197 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.37■■■□□ 2.61
NEFMP07197 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
NEFMP07197 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NEFMP07197 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NEFMP07197 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NEFMP07197 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.36■■■□□ 2.61
NEFMP07197 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.36■■■□□ 2.61
NEFMP07197 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
NEFMP07197 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.36■■■□□ 2.61
NEFMP07197 AL031848.2-201ENST00000607670 837 ntBASIC31.36■■■□□ 2.61
NEFMP07197 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NEFMP07197 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NEFMP07197 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.35■■■□□ 2.61
NEFMP07197 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.35■■■□□ 2.61
NEFMP07197 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
NEFMP07197 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
NEFMP07197 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NEFMP07197 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
NEFMP07197 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NEFMP07197 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
NEFMP07197 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.34■■■□□ 2.61
NEFMP07197 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
NEFMP07197 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NEFMP07197 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.33■■■□□ 2.61
NEFMP07197 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NEFMP07197 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.33■■■□□ 2.61
NEFMP07197 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.33■■■□□ 2.61
NEFMP07197 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NEFMP07197 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
NEFMP07197 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NEFMP07197 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NEFMP07197 FOXO3B-201ENST00000395675 1928 ntBASIC31.32■■■□□ 2.6
NEFMP07197 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
NEFMP07197 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NEFMP07197 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.31■■■□□ 2.6
NEFMP07197 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
NEFMP07197 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
NEFMP07197 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.31■■■□□ 2.6
NEFMP07197 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.3■■■□□ 2.6
NEFMP07197 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
NEFMP07197 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.3■■■□□ 2.6
NEFMP07197 AL451085.2-201ENST00000605085 799 ntBASIC31.3■■■□□ 2.6
NEFMP07197 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NEFMP07197 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NEFMP07197 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.3■■■□□ 2.6
NEFMP07197 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NEFMP07197 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
NEFMP07197 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NEFMP07197 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NEFMP07197 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NEFMP07197 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NEFMP07197 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NEFMP07197 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NEFMP07197 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NEFMP07197 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
NEFMP07197 THA1P-201ENST00000590384 1145 ntBASIC31.28■■■□□ 2.6
NEFMP07197 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.28■■■□□ 2.6
NEFMP07197 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEFMP07197 KRT18P24-201ENST00000344739 1156 ntBASIC31.27■■■□□ 2.6
NEFMP07197 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEFMP07197 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
NEFMP07197 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.27■■■□□ 2.6
NEFMP07197 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEFMP07197 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.27■■■□□ 2.6
NEFMP07197 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
NEFMP07197 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.59
NEFMP07197 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NEFMP07197 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.25■■■□□ 2.59
NEFMP07197 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NEFMP07197 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NEFMP07197 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NEFMP07197 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NEFMP07197 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NEFMP07197 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.24■■■□□ 2.59
NEFMP07197 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.23■■■□□ 2.59
NEFMP07197 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NEFMP07197 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NEFMP07197 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
NEFMP07197 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
NEFMP07197 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
NEFMP07197 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NEFMP07197 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NEFMP07197 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NEFMP07197 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.22■■■□□ 2.59
NEFMP07197 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 AC009299.2-201ENST00000482477 511 ntBASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms