Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GYPBP06028 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GYPBP06028 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GYPBP06028 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GYPBP06028 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GYPBP06028 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.13■□□□□ 0.97
GYPBP06028 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GYPBP06028 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GYPBP06028 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.12■□□□□ 0.97
GYPBP06028 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GYPBP06028 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
GYPBP06028 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
GYPBP06028 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GYPBP06028 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GYPBP06028 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GYPBP06028 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GYPBP06028 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GYPBP06028 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GYPBP06028 MIR639-201ENST00000384974 98 ntBASIC21.11■□□□□ 0.97
GYPBP06028 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.11■□□□□ 0.97
GYPBP06028 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GYPBP06028 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GYPBP06028 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GYPBP06028 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.1■□□□□ 0.97
GYPBP06028 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GYPBP06028 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GYPBP06028 AC022413.1-201ENST00000624602 984 ntBASIC21.1■□□□□ 0.97
GYPBP06028 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GYPBP06028 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GYPBP06028 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GYPBP06028 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GYPBP06028 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.09■□□□□ 0.97
GYPBP06028 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GYPBP06028 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
GYPBP06028 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GYPBP06028 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GYPBP06028 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.97
GYPBP06028 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GYPBP06028 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.08■□□□□ 0.97
GYPBP06028 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GYPBP06028 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GYPBP06028 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GYPBP06028 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
GYPBP06028 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.08■□□□□ 0.97
GYPBP06028 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GYPBP06028 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GYPBP06028 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
GYPBP06028 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GYPBP06028 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GYPBP06028 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GYPBP06028 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.07■□□□□ 0.96
GYPBP06028 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.07■□□□□ 0.96
GYPBP06028 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GYPBP06028 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GYPBP06028 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GYPBP06028 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GYPBP06028 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GYPBP06028 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GYPBP06028 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.06■□□□□ 0.96
GYPBP06028 RP9P-202ENST00000450133 1212 ntBASIC21.06■□□□□ 0.96
GYPBP06028 ECEL1P2-201ENST00000461596 1295 ntBASIC21.06■□□□□ 0.96
GYPBP06028 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.06■□□□□ 0.96
GYPBP06028 AC093536.1-201ENST00000569153 554 ntBASIC21.06■□□□□ 0.96
GYPBP06028 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GYPBP06028 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.06■□□□□ 0.96
GYPBP06028 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
GYPBP06028 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GYPBP06028 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GYPBP06028 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GYPBP06028 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GYPBP06028 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GYPBP06028 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GYPBP06028 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GYPBP06028 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.04■□□□□ 0.96
GYPBP06028 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.04■□□□□ 0.96
GYPBP06028 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.04■□□□□ 0.96
GYPBP06028 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GYPBP06028 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GYPBP06028 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.03■□□□□ 0.96
GYPBP06028 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
GYPBP06028 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GYPBP06028 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GYPBP06028 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.02■□□□□ 0.96
GYPBP06028 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.02■□□□□ 0.96
GYPBP06028 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms