Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 HLA-V-202ENST00000446817 847 ntBASIC23.84■■□□□ 1.41
CDH16O75309 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.84■■□□□ 1.41
CDH16O75309 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDH16O75309 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH16O75309 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.84■■□□□ 1.41
CDH16O75309 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH16O75309 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH16O75309 AC004812.2-201ENST00000611079 2094 ntBASIC23.83■■□□□ 1.41
CDH16O75309 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH16O75309 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.83■■□□□ 1.41
CDH16O75309 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH16O75309 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH16O75309 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDH16O75309 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDH16O75309 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH16O75309 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CDH16O75309 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH16O75309 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CDH16O75309 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.82■■□□□ 1.4
CDH16O75309 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.82■■□□□ 1.4
CDH16O75309 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDH16O75309 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.81■■□□□ 1.4
CDH16O75309 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH16O75309 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH16O75309 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDH16O75309 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDH16O75309 ZNRF2P2-203ENST00000454624 420 ntBASIC23.81■■□□□ 1.4
CDH16O75309 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.81■■□□□ 1.4
CDH16O75309 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH16O75309 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH16O75309 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH16O75309 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH16O75309 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDH16O75309 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.8■■□□□ 1.4
CDH16O75309 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDH16O75309 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CDH16O75309 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH16O75309 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH16O75309 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.8■■□□□ 1.4
CDH16O75309 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CDH16O75309 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.8■■□□□ 1.4
CDH16O75309 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.8■■□□□ 1.4
CDH16O75309 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDH16O75309 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH16O75309 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CDH16O75309 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.78■■□□□ 1.4
CDH16O75309 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH16O75309 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH16O75309 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CDH16O75309 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH16O75309 DUX4L11-201ENST00000611504 1267 ntBASIC23.78■■□□□ 1.4
CDH16O75309 DUX4L12-201ENST00000614593 1267 ntBASIC23.78■■□□□ 1.4
CDH16O75309 DUX4L14-201ENST00000621227 1267 ntBASIC23.78■■□□□ 1.4
CDH16O75309 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH16O75309 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CDH16O75309 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH16O75309 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.78■■□□□ 1.4
CDH16O75309 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH16O75309 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.78■■□□□ 1.4
CDH16O75309 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH16O75309 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH16O75309 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDH16O75309 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH16O75309 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH16O75309 AC126177.7-201ENST00000547904 679 ntBASIC23.77■■□□□ 1.4
CDH16O75309 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CDH16O75309 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH16O75309 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH16O75309 MIR6089-201ENST00000616698 64 ntBASIC23.76■■□□□ 1.39
CDH16O75309 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.76■■□□□ 1.39
CDH16O75309 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH16O75309 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH16O75309 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
CDH16O75309 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.75■■□□□ 1.39
CDH16O75309 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH16O75309 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CDH16O75309 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDH16O75309 MIR7108-201ENST00000614319 87 ntBASIC23.74■■□□□ 1.39
CDH16O75309 AC079834.2-201ENST00000609776 1949 ntBASIC23.74■■□□□ 1.39
CDH16O75309 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CDH16O75309 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH16O75309 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH16O75309 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDH16O75309 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH16O75309 ABCB10P4-201ENST00000566803 2184 ntBASIC23.72■■□□□ 1.39
CDH16O75309 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH16O75309 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH16O75309 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH16O75309 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.72■■□□□ 1.39
CDH16O75309 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
CDH16O75309 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.72■■□□□ 1.39
CDH16O75309 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH16O75309 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.72■■□□□ 1.39
CDH16O75309 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH16O75309 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH16O75309 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH16O75309 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH16O75309 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH16O75309 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH16O75309 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms