Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RTL8CO15255 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTL8CO15255 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTL8CO15255 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTL8CO15255 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTL8CO15255 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.84■□□□□ 0.13
RTL8CO15255 AC011551.1-201ENST00000614101 683 ntBASIC15.84■□□□□ 0.13
RTL8CO15255 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTL8CO15255 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTL8CO15255 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RTL8CO15255 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RTL8CO15255 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RTL8CO15255 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC15.83■□□□□ 0.12
RTL8CO15255 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTL8CO15255 ZNRF2P3-201ENST00000424200 374 ntBASIC15.83■□□□□ 0.12
RTL8CO15255 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.83■□□□□ 0.12
RTL8CO15255 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTL8CO15255 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTL8CO15255 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL8CO15255 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL8CO15255 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.82■□□□□ 0.12
RTL8CO15255 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.82■□□□□ 0.12
RTL8CO15255 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.82■□□□□ 0.12
RTL8CO15255 RARRES2P6-201ENST00000567333 442 ntBASIC15.82■□□□□ 0.12
RTL8CO15255 AC092666.2-201ENST00000613287 246 ntBASIC15.82■□□□□ 0.12
RTL8CO15255 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.82■□□□□ 0.12
RTL8CO15255 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL8CO15255 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL8CO15255 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL8CO15255 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL8CO15255 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.81■□□□□ 0.12
RTL8CO15255 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL8CO15255 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL8CO15255 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTL8CO15255 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RTL8CO15255 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.81■□□□□ 0.12
RTL8CO15255 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL8CO15255 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.8■□□□□ 0.12
RTL8CO15255 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.8■□□□□ 0.12
RTL8CO15255 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.8■□□□□ 0.12
RTL8CO15255 AC106739.1-201ENST00000617035 715 ntBASIC15.8■□□□□ 0.12
RTL8CO15255 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL8CO15255 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL8CO15255 AC142472.1-201ENST00000612013 1741 ntBASIC15.8■□□□□ 0.12
RTL8CO15255 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTL8CO15255 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RTL8CO15255 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTL8CO15255 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTL8CO15255 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTL8CO15255 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.79■□□□□ 0.12
RTL8CO15255 PBX2P1-201ENST00000493219 1291 ntBASIC15.79■□□□□ 0.12
RTL8CO15255 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTL8CO15255 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTL8CO15255 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTL8CO15255 AC142086.6-201ENST00000621154 1765 ntBASIC15.79■□□□□ 0.12
RTL8CO15255 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RTL8CO15255 AC142381.2-201ENST00000566120 298 ntBASIC15.78■□□□□ 0.12
RTL8CO15255 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RTL8CO15255 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTL8CO15255 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC15.78■□□□□ 0.12
RTL8CO15255 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RTL8CO15255 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RTL8CO15255 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTL8CO15255 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.77■□□□□ 0.12
RTL8CO15255 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.77■□□□□ 0.12
RTL8CO15255 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RTL8CO15255 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RTL8CO15255 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.77■□□□□ 0.11
RTL8CO15255 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTL8CO15255 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.76■□□□□ 0.11
RTL8CO15255 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTL8CO15255 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTL8CO15255 AC026271.2-201ENST00000428091 497 ntBASIC15.76■□□□□ 0.11
RTL8CO15255 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.76■□□□□ 0.11
RTL8CO15255 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTL8CO15255 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTL8CO15255 AF131216.4-201ENST00000638924 1588 ntBASIC15.75■□□□□ 0.11
RTL8CO15255 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.75■□□□□ 0.11
RTL8CO15255 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTL8CO15255 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.75■□□□□ 0.11
RTL8CO15255 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.75■□□□□ 0.11
RTL8CO15255 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTL8CO15255 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.75■□□□□ 0.11
RTL8CO15255 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTL8CO15255 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTL8CO15255 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RTL8CO15255 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
RTL8CO15255 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.74■□□□□ 0.11
RTL8CO15255 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTL8CO15255 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms