Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KPNA4O00629 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KPNA4O00629 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KPNA4O00629 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KPNA4O00629 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
KPNA4O00629 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KPNA4O00629 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KPNA4O00629 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.87■■□□□ 1.09
KPNA4O00629 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.87■■□□□ 1.09
KPNA4O00629 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KPNA4O00629 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.86■■□□□ 1.09
KPNA4O00629 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.86■■□□□ 1.09
KPNA4O00629 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
KPNA4O00629 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KPNA4O00629 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
KPNA4O00629 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KPNA4O00629 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KPNA4O00629 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
KPNA4O00629 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KPNA4O00629 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KPNA4O00629 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KPNA4O00629 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.85■■□□□ 1.09
KPNA4O00629 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.85■■□□□ 1.09
KPNA4O00629 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KPNA4O00629 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KPNA4O00629 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.84■■□□□ 1.09
KPNA4O00629 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KPNA4O00629 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KPNA4O00629 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KPNA4O00629 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KPNA4O00629 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KPNA4O00629 AC022211.4-201ENST00000625094 2161 ntBASIC21.84■■□□□ 1.09
KPNA4O00629 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.84■■□□□ 1.09
KPNA4O00629 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.83■■□□□ 1.09
KPNA4O00629 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KPNA4O00629 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KPNA4O00629 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.83■■□□□ 1.09
KPNA4O00629 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.83■■□□□ 1.09
KPNA4O00629 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KPNA4O00629 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KPNA4O00629 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KPNA4O00629 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.83■■□□□ 1.08
KPNA4O00629 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KPNA4O00629 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KPNA4O00629 AC142381.3-201ENST00000568208 1670 ntBASIC21.82■■□□□ 1.08
KPNA4O00629 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.82■■□□□ 1.08
KPNA4O00629 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.82■■□□□ 1.08
KPNA4O00629 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.82■■□□□ 1.08
KPNA4O00629 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.82■■□□□ 1.08
KPNA4O00629 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KPNA4O00629 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KPNA4O00629 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KPNA4O00629 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KPNA4O00629 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.81■■□□□ 1.08
KPNA4O00629 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KPNA4O00629 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KPNA4O00629 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.8■■□□□ 1.08
KPNA4O00629 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
KPNA4O00629 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KPNA4O00629 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.8■■□□□ 1.08
KPNA4O00629 AL139125.2-201ENST00000623134 1869 ntBASIC21.8■■□□□ 1.08
KPNA4O00629 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KPNA4O00629 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KPNA4O00629 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KPNA4O00629 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KPNA4O00629 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
KPNA4O00629 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KPNA4O00629 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KPNA4O00629 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KPNA4O00629 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KPNA4O00629 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KPNA4O00629 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 AC138932.3-201ENST00000567634 1902 ntBASIC21.78■■□□□ 1.08
KPNA4O00629 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 AC025884.2-201ENST00000553429 711 ntBASIC21.78■■□□□ 1.08
KPNA4O00629 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.78■■□□□ 1.08
KPNA4O00629 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KPNA4O00629 SMPD5-203ENST00000639008 1464 ntBASIC21.77■■□□□ 1.08
KPNA4O00629 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KPNA4O00629 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KPNA4O00629 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KPNA4O00629 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.77■■□□□ 1.08
KPNA4O00629 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.77■■□□□ 1.08
KPNA4O00629 AC022413.1-201ENST00000624602 984 ntBASIC21.77■■□□□ 1.08
KPNA4O00629 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KPNA4O00629 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KPNA4O00629 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KPNA4O00629 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KPNA4O00629 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KPNA4O00629 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KPNA4O00629 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KPNA4O00629 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
KPNA4O00629 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.76■■□□□ 1.07
KPNA4O00629 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KPNA4O00629 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms