Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM6-TRIM34B2RNG4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM6-TRIM34B2RNG4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.82■■■□□ 2.2
TRIM6-TRIM34B2RNG4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM6-TRIM34B2RNG4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TRIM6-TRIM34B2RNG4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
TRIM6-TRIM34B2RNG4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM6-TRIM34B2RNG4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM6-TRIM34B2RNG4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM6-TRIM34B2RNG4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
TRIM6-TRIM34B2RNG4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.81■■■□□ 2.2
TRIM6-TRIM34B2RNG4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.81■■■□□ 2.2
TRIM6-TRIM34B2RNG4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRIM6-TRIM34B2RNG4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM6-TRIM34B2RNG4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM6-TRIM34B2RNG4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRIM6-TRIM34B2RNG4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.8■■■□□ 2.2
TRIM6-TRIM34B2RNG4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.8■■■□□ 2.2
TRIM6-TRIM34B2RNG4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TRIM6-TRIM34B2RNG4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TRIM6-TRIM34B2RNG4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
TRIM6-TRIM34B2RNG4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TRIM6-TRIM34B2RNG4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TRIM6-TRIM34B2RNG4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.79■■■□□ 2.2
TRIM6-TRIM34B2RNG4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.79■■■□□ 2.2
TRIM6-TRIM34B2RNG4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TRIM6-TRIM34B2RNG4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.79■■■□□ 2.2
TRIM6-TRIM34B2RNG4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TRIM6-TRIM34B2RNG4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.78■■■□□ 2.2
TRIM6-TRIM34B2RNG4 DUX4L18-201ENST00000553347 1267 ntBASIC28.78■■■□□ 2.2
TRIM6-TRIM34B2RNG4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.78■■■□□ 2.2
TRIM6-TRIM34B2RNG4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TRIM6-TRIM34B2RNG4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
TRIM6-TRIM34B2RNG4 FOXO3B-201ENST00000395675 1928 ntBASIC28.77■■■□□ 2.2
TRIM6-TRIM34B2RNG4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.77■■■□□ 2.2
TRIM6-TRIM34B2RNG4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TRIM6-TRIM34B2RNG4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TRIM6-TRIM34B2RNG4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.76■■■□□ 2.19
TRIM6-TRIM34B2RNG4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM6-TRIM34B2RNG4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM6-TRIM34B2RNG4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM6-TRIM34B2RNG4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM6-TRIM34B2RNG4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
TRIM6-TRIM34B2RNG4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.75■■■□□ 2.19
TRIM6-TRIM34B2RNG4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
TRIM6-TRIM34B2RNG4 AC087393.1-201ENST00000582896 145 ntBASIC28.75■■■□□ 2.19
TRIM6-TRIM34B2RNG4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.75■■■□□ 2.19
TRIM6-TRIM34B2RNG4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TRIM6-TRIM34B2RNG4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
TRIM6-TRIM34B2RNG4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TRIM6-TRIM34B2RNG4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.74■■■□□ 2.19
TRIM6-TRIM34B2RNG4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
TRIM6-TRIM34B2RNG4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TRIM6-TRIM34B2RNG4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
TRIM6-TRIM34B2RNG4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TRIM6-TRIM34B2RNG4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TRIM6-TRIM34B2RNG4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TRIM6-TRIM34B2RNG4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TRIM6-TRIM34B2RNG4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM6-TRIM34B2RNG4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
TRIM6-TRIM34B2RNG4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
TRIM6-TRIM34B2RNG4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
TRIM6-TRIM34B2RNG4 AP003733.4-201ENST00000623785 1697 ntBASIC28.7■■■□□ 2.18
TRIM6-TRIM34B2RNG4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TRIM6-TRIM34B2RNG4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TRIM6-TRIM34B2RNG4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TRIM6-TRIM34B2RNG4 AC004987.1-201ENST00000428627 508 ntBASIC28.69■■■□□ 2.18
TRIM6-TRIM34B2RNG4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
TRIM6-TRIM34B2RNG4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
TRIM6-TRIM34B2RNG4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
TRIM6-TRIM34B2RNG4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.68■■■□□ 2.18
TRIM6-TRIM34B2RNG4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.68■■■□□ 2.18
TRIM6-TRIM34B2RNG4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 ATP5G2P3-201ENST00000429083 425 ntBASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 AL139125.2-201ENST00000623134 1869 ntBASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM6-TRIM34B2RNG4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM6-TRIM34B2RNG4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM6-TRIM34B2RNG4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.66■■■□□ 2.18
TRIM6-TRIM34B2RNG4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms