Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRRM4A7MD48 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRRM4A7MD48 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRRM4A7MD48 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.99■□□□□ 0.63
SRRM4A7MD48 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRRM4A7MD48 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRRM4A7MD48 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRRM4A7MD48 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRRM4A7MD48 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRRM4A7MD48 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.98■□□□□ 0.63
SRRM4A7MD48 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SRRM4A7MD48 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.98■□□□□ 0.63
SRRM4A7MD48 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.98■□□□□ 0.63
SRRM4A7MD48 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.98■□□□□ 0.63
SRRM4A7MD48 LINC01124-201ENST00000409786 2117 ntBASIC18.98■□□□□ 0.63
SRRM4A7MD48 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRRM4A7MD48 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.97■□□□□ 0.63
SRRM4A7MD48 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM4A7MD48 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRRM4A7MD48 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.97■□□□□ 0.63
SRRM4A7MD48 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.97■□□□□ 0.63
SRRM4A7MD48 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM4A7MD48 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.96■□□□□ 0.63
SRRM4A7MD48 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.96■□□□□ 0.63
SRRM4A7MD48 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM4A7MD48 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM4A7MD48 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.96■□□□□ 0.63
SRRM4A7MD48 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRRM4A7MD48 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM4A7MD48 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SRRM4A7MD48 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.95■□□□□ 0.62
SRRM4A7MD48 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM4A7MD48 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM4A7MD48 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM4A7MD48 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM4A7MD48 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SRRM4A7MD48 KRT18P10-201ENST00000388836 1287 ntBASIC18.94■□□□□ 0.62
SRRM4A7MD48 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
SRRM4A7MD48 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM4A7MD48 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM4A7MD48 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM4A7MD48 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.94■□□□□ 0.62
SRRM4A7MD48 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM4A7MD48 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.93■□□□□ 0.62
SRRM4A7MD48 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.93■□□□□ 0.62
SRRM4A7MD48 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.93■□□□□ 0.62
SRRM4A7MD48 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.93■□□□□ 0.62
SRRM4A7MD48 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 RARRES2P2-201ENST00000394842 485 ntBASIC18.93■□□□□ 0.62
SRRM4A7MD48 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SRRM4A7MD48 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 AL592293.1-201ENST00000502889 1188 ntBASIC18.93■□□□□ 0.62
SRRM4A7MD48 HSD17B1P1-201ENST00000590052 955 ntBASIC18.93■□□□□ 0.62
SRRM4A7MD48 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.93■□□□□ 0.62
SRRM4A7MD48 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.93■□□□□ 0.62
SRRM4A7MD48 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM4A7MD48 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.92■□□□□ 0.62
SRRM4A7MD48 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SRRM4A7MD48 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM4A7MD48 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM4A7MD48 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.92■□□□□ 0.62
SRRM4A7MD48 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SRRM4A7MD48 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SRRM4A7MD48 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.91■□□□□ 0.62
SRRM4A7MD48 SPCS2P3-201ENST00000500401 656 ntBASIC18.91■□□□□ 0.62
SRRM4A7MD48 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SRRM4A7MD48 MIR6089-201ENST00000616698 64 ntBASIC18.91■□□□□ 0.62
SRRM4A7MD48 FOXO3B-201ENST00000395675 1928 ntBASIC18.91■□□□□ 0.62
SRRM4A7MD48 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.91■□□□□ 0.62
SRRM4A7MD48 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.91■□□□□ 0.62
SRRM4A7MD48 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM4A7MD48 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.91■□□□□ 0.62
SRRM4A7MD48 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM4A7MD48 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
SRRM4A7MD48 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM4A7MD48 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM4A7MD48 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.9■□□□□ 0.62
SRRM4A7MD48 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM4A7MD48 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM4A7MD48 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SRRM4A7MD48 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRRM4A7MD48 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRRM4A7MD48 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SRRM4A7MD48 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.89■□□□□ 0.62
SRRM4A7MD48 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM4A7MD48 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.89■□□□□ 0.61
SRRM4A7MD48 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms