Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.77■■□□□ 1.08
SH3D21A4FU49 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3D21A4FU49 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3D21A4FU49 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3D21A4FU49 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.77■■□□□ 1.08
SH3D21A4FU49 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3D21A4FU49 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SH3D21A4FU49 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SH3D21A4FU49 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.76■■□□□ 1.07
SH3D21A4FU49 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SH3D21A4FU49 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SH3D21A4FU49 AC133552.2-201ENST00000619106 1032 ntBASIC21.76■■□□□ 1.07
SH3D21A4FU49 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3D21A4FU49 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.75■■□□□ 1.07
SH3D21A4FU49 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3D21A4FU49 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3D21A4FU49 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SH3D21A4FU49 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SH3D21A4FU49 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3D21A4FU49 AC009831.1-201ENST00000580420 1582 ntBASIC21.74■■□□□ 1.07
SH3D21A4FU49 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3D21A4FU49 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3D21A4FU49 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3D21A4FU49 LINC01124-201ENST00000409786 2117 ntBASIC21.74■■□□□ 1.07
SH3D21A4FU49 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3D21A4FU49 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3D21A4FU49 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3D21A4FU49 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3D21A4FU49 AL592293.1-201ENST00000502889 1188 ntBASIC21.73■■□□□ 1.07
SH3D21A4FU49 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3D21A4FU49 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3D21A4FU49 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SH3D21A4FU49 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3D21A4FU49 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
SH3D21A4FU49 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3D21A4FU49 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3D21A4FU49 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3D21A4FU49 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3D21A4FU49 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SH3D21A4FU49 AC129492.7-201ENST00000622992 756 ntBASIC21.72■■□□□ 1.07
SH3D21A4FU49 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3D21A4FU49 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3D21A4FU49 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3D21A4FU49 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SH3D21A4FU49 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3D21A4FU49 AC133561.1-201ENST00000568600 2415 ntBASIC21.71■■□□□ 1.07
SH3D21A4FU49 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3D21A4FU49 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SH3D21A4FU49 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
SH3D21A4FU49 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3D21A4FU49 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SH3D21A4FU49 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3D21A4FU49 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3D21A4FU49 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3D21A4FU49 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SH3D21A4FU49 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.7■■□□□ 1.06
SH3D21A4FU49 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.7■■□□□ 1.06
SH3D21A4FU49 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3D21A4FU49 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.69■■□□□ 1.06
SH3D21A4FU49 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3D21A4FU49 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3D21A4FU49 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3D21A4FU49 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.69■■□□□ 1.06
SH3D21A4FU49 AC025884.2-201ENST00000553429 711 ntBASIC21.69■■□□□ 1.06
SH3D21A4FU49 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3D21A4FU49 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SH3D21A4FU49 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3D21A4FU49 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3D21A4FU49 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3D21A4FU49 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3D21A4FU49 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3D21A4FU49 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3D21A4FU49 DUX4L18-201ENST00000553347 1267 ntBASIC21.68■■□□□ 1.06
SH3D21A4FU49 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SH3D21A4FU49 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3D21A4FU49 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3D21A4FU49 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3D21A4FU49 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3D21A4FU49 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3D21A4FU49 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3D21A4FU49 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3D21A4FU49 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3D21A4FU49 AC026202.3-201ENST00000600805 1127 ntBASIC21.67■■□□□ 1.06
SH3D21A4FU49 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3D21A4FU49 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3D21A4FU49 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3D21A4FU49 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3D21A4FU49 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3D21A4FU49 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms