Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 THA1P-201ENST00000590384 1145 ntBASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
IGHV4-28A0A0C4DH34 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV4-28A0A0C4DH34 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 AC120024.1-201ENST00000562672 995 ntBASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.02■□□□□ 0.32
IGHV4-28A0A0C4DH34 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
IGHV4-28A0A0C4DH34 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGHV4-28A0A0C4DH34 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.02■□□□□ 0.31
IGHV4-28A0A0C4DH34 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGHV4-28A0A0C4DH34 AC091060.1-201ENST00000623524 1766 ntBASIC17.02■□□□□ 0.31
IGHV4-28A0A0C4DH34 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGHV4-28A0A0C4DH34 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IGHV4-28A0A0C4DH34 KRT18P24-201ENST00000344739 1156 ntBASIC17.01■□□□□ 0.31
IGHV4-28A0A0C4DH34 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.01■□□□□ 0.31
IGHV4-28A0A0C4DH34 FOXO3B-201ENST00000395675 1928 ntBASIC17.01■□□□□ 0.31
IGHV4-28A0A0C4DH34 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
IGHV4-28A0A0C4DH34 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGHV4-28A0A0C4DH34 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 DUSP8P4-201ENST00000399538 1761 ntBASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17■□□□□ 0.31
IGHV4-28A0A0C4DH34 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 AC145676.1-201ENST00000514988 2004 ntBASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
IGHV4-28A0A0C4DH34 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGHV4-28A0A0C4DH34 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGHV4-28A0A0C4DH34 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.97■□□□□ 0.31
IGHV4-28A0A0C4DH34 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGHV4-28A0A0C4DH34 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.97■□□□□ 0.31
IGHV4-28A0A0C4DH34 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGHV4-28A0A0C4DH34 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
IGHV4-28A0A0C4DH34 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGHV4-28A0A0C4DH34 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IGHV4-28A0A0C4DH34 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
IGHV4-28A0A0C4DH34 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
IGHV4-28A0A0C4DH34 AC011551.1-201ENST00000614101 683 ntBASIC16.96■□□□□ 0.31
IGHV4-28A0A0C4DH34 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
IGHV4-28A0A0C4DH34 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
IGHV4-28A0A0C4DH34 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IGHV4-28A0A0C4DH34 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 AC239859.2-201ENST00000444165 318 ntBASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IGHV4-28A0A0C4DH34 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms