Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-1A0A0B4J245 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 ABCB10P4-201ENST00000566803 2184 ntBASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV12-1A0A0B4J245 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV12-1A0A0B4J245 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV12-1A0A0B4J245 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRAV12-1A0A0B4J245 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV12-1A0A0B4J245 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV12-1A0A0B4J245 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV12-1A0A0B4J245 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV12-1A0A0B4J245 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV12-1A0A0B4J245 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV12-1A0A0B4J245 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRAV12-1A0A0B4J245 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TRAV12-1A0A0B4J245 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV12-1A0A0B4J245 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV12-1A0A0B4J245 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 LINC00565-201ENST00000562710 2331 ntBASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV12-1A0A0B4J245 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 AC233723.2-201ENST00000623798 2106 ntBASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV12-1A0A0B4J245 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 RARRES2P7-201ENST00000567349 469 ntBASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV12-1A0A0B4J245 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV12-1A0A0B4J245 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV12-1A0A0B4J245 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRAV12-1A0A0B4J245 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV12-1A0A0B4J245 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 MIR762-201ENST00000390236 83 ntBASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-1A0A0B4J245 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms