Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV3A0A0B4J244 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV3A0A0B4J244 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV3A0A0B4J244 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV3A0A0B4J244 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV3A0A0B4J244 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV3A0A0B4J244 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV3A0A0B4J244 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV3A0A0B4J244 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV3A0A0B4J244 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV3A0A0B4J244 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV3A0A0B4J244 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV3A0A0B4J244 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV3A0A0B4J244 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV3A0A0B4J244 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV3A0A0B4J244 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 AC007029.1-201ENST00000604183 313 ntBASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 LINC00543-201ENST00000567234 1845 ntBASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV3A0A0B4J244 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV3A0A0B4J244 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV3A0A0B4J244 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TRAV3A0A0B4J244 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV3A0A0B4J244 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV3A0A0B4J244 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV3A0A0B4J244 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV3A0A0B4J244 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAV3A0A0B4J244 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRAV3A0A0B4J244 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV3A0A0B4J244 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 GPX1-201ENST00000419349 1106 ntBASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 RAP2CP1-202ENST00000605179 643 ntBASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV3A0A0B4J244 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV3A0A0B4J244 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV3A0A0B4J244 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV3A0A0B4J244 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV3A0A0B4J244 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV3A0A0B4J244 MIR4449-201ENST00000578365 66 ntBASIC18.89■□□□□ 0.61
TRAV3A0A0B4J244 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV3A0A0B4J244 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV3A0A0B4J244 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV3A0A0B4J244 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV3A0A0B4J244 AC026202.3-201ENST00000600805 1127 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms