Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 MIR639-201ENST00000384974 98 ntBASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TRAV16A0A0A6YYK6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 AC126177.7-201ENST00000547904 679 ntBASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV16A0A0A6YYK6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV16A0A0A6YYK6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV16A0A0A6YYK6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV16A0A0A6YYK6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV16A0A0A6YYK6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV16A0A0A6YYK6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV16A0A0A6YYK6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRAV16A0A0A6YYK6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV16A0A0A6YYK6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV16A0A0A6YYK6 AC097639.1-201ENST00000565519 1891 ntBASIC16.27■□□□□ 0.19
TRAV16A0A0A6YYK6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV16A0A0A6YYK6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 AC010501.1-201ENST00000606270 1962 ntBASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 MIR219A2-201ENST00000608502 1504 ntBASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV16A0A0A6YYK6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV16A0A0A6YYK6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV16A0A0A6YYK6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV16A0A0A6YYK6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV16A0A0A6YYK6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV16A0A0A6YYK6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV16A0A0A6YYK6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV16A0A0A6YYK6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV16A0A0A6YYK6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms