Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 AC068473.5-201ENST00000616428 2072 ntBASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 AC012676.1-201ENST00000574705 1949 ntBASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV8-1A0A0A6YYK1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.85■□□□□ 0.45
TRAV8-1A0A0A6YYK1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-1A0A0A6YYK1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-1A0A0A6YYK1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-1A0A0A6YYK1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-1A0A0A6YYK1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-1A0A0A6YYK1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRAV8-1A0A0A6YYK1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
TRAV8-1A0A0A6YYK1 AC004812.2-201ENST00000611079 2094 ntBASIC17.83■□□□□ 0.45
TRAV8-1A0A0A6YYK1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-1A0A0A6YYK1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV8-1A0A0A6YYK1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV8-1A0A0A6YYK1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRAV8-1A0A0A6YYK1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 AC141586.4-201ENST00000624558 1573 ntBASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-1A0A0A6YYK1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-1A0A0A6YYK1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-1A0A0A6YYK1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-1A0A0A6YYK1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ABCB10P4-201ENST00000566803 2184 ntBASIC17.8■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV8-1A0A0A6YYK1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-1A0A0A6YYK1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 RPS2P35-201ENST00000443417 897 ntBASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 AC126177.7-201ENST00000547904 679 ntBASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAV8-1A0A0A6YYK1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAV8-1A0A0A6YYK1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV8-1A0A0A6YYK1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAV8-1A0A0A6YYK1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-1A0A0A6YYK1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms