Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 AC007029.1-201ENST00000604183 313 ntBASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 LINC00543-201ENST00000567234 1845 ntBASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV30A0A087WSZ9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV30A0A087WSZ9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 MIR4449-201ENST00000578365 66 ntBASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV30A0A087WSZ9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRAV30A0A087WSZ9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV30A0A087WSZ9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV30A0A087WSZ9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV30A0A087WSZ9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 GPX1-201ENST00000419349 1106 ntBASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV30A0A087WSZ9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV30A0A087WSZ9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV30A0A087WSZ9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV30A0A087WSZ9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV30A0A087WSZ9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV30A0A087WSZ9 AC141586.4-201ENST00000624558 1573 ntBASIC18.36■□□□□ 0.53
TRAV30A0A087WSZ9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV30A0A087WSZ9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV30A0A087WSZ9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms