Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 MIR600HG-201ENST00000449175 5984 ntBASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 POM121L3P-201ENST00000419331 1163 ntBASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 AC073592.4-201ENST00000623827 446 ntBASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGB1Q9Y5G3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 LINC00528-201ENST00000600723 2160 ntBASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 RCN1P2-201ENST00000398357 915 ntBASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 AL022342.1-201ENST00000400363 863 ntBASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 AC096582.2-201ENST00000510860 516 ntBASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 AP005901.3-202ENST00000581653 237 ntBASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 IFNL4P1-201ENST00000607083 540 ntBASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms