Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 AC092183.1-201ENST00000469884 875 ntBASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 AC015911.4-201ENST00000588022 1070 ntBASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 AL133215.2-201ENST00000609242 977 ntBASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 LINC02199-201ENST00000506655 2702 ntBASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 CROCCP1-201ENST00000426910 5675 ntBASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 AL365203.3-201ENST00000609742 2057 ntBASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHA4Q9UN74 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 CYP4F24P-201ENST00000586049 1580 ntBASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 AC004987.2-201ENST00000395959 1148 ntBASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 CNN2P2-201ENST00000443536 909 ntBASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 CNN2P3-201ENST00000450201 906 ntBASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 RN7SL828P-201ENST00000607615 303 ntBASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 AL136317.3-201ENST00000618497 906 ntBASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 BNIP3P1-202ENST00000550043 1585 ntBASIC18.47■□□□□ 0.55
PCDHA4Q9UN74 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 TUBB3P1-201ENST00000405796 1332 ntBASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHA4Q9UN74 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHA4Q9UN74 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.46■□□□□ 0.54
PCDHA4Q9UN74 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHA4Q9UN74 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHA4Q9UN74 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA4Q9UN74 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms