Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 AC005622.1-201ENST00000636801 1703 ntBASIC14.88□□□□□ -0.03
CLN6Q9NWW5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLN6Q9NWW5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 AP005117.1-201ENST00000584346 1413 ntBASIC14.87□□□□□ -0.03
CLN6Q9NWW5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.87□□□□□ -0.03
CLN6Q9NWW5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 MIR3180-1-201ENST00000580374 94 ntBASIC14.87□□□□□ -0.03
CLN6Q9NWW5 MIR3180-3-201ENST00000584616 94 ntBASIC14.87□□□□□ -0.03
CLN6Q9NWW5 AL591684.3-201ENST00000605187 298 ntBASIC14.87□□□□□ -0.03
CLN6Q9NWW5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 AL109954.1-202ENST00000564051 2148 ntBASIC14.87□□□□□ -0.03
CLN6Q9NWW5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLN6Q9NWW5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 NUS1P2-201ENST00000417358 873 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 PMS2P1-201ENST00000431037 1228 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AC087163.2-201ENST00000457299 853 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AC087641.1-201ENST00000557561 1021 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AL049597.2-201ENST00000565575 961 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AC064862.7-201ENST00000604520 867 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 AL353732.1-201ENST00000569618 1459 ntBASIC14.86□□□□□ -0.03
CLN6Q9NWW5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLN6Q9NWW5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms