Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ECHDC1Q9NTX5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 CYP4F24P-201ENST00000586049 1580 ntBASIC19.7■□□□□ 0.74
ECHDC1Q9NTX5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 AC004987.2-201ENST00000395959 1148 ntBASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 AC015911.4-201ENST00000588022 1070 ntBASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 AL133215.2-201ENST00000609242 977 ntBASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 BNIP3P1-202ENST00000550043 1585 ntBASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 AL035456.1-201ENST00000456064 1369 ntBASIC19.69■□□□□ 0.74
ECHDC1Q9NTX5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 CNN2P2-201ENST00000443536 909 ntBASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 CNN2P3-201ENST00000450201 906 ntBASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 AC092183.1-201ENST00000469884 875 ntBASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 RN7SL828P-201ENST00000607615 303 ntBASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 AL136317.3-201ENST00000618497 906 ntBASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 AC011477.6-201ENST00000604980 1927 ntBASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms