Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 AC135279.3-201ENST00000610945 1311 ntBASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 AL022323.5-201ENST00000624101 2059 ntBASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42SE1Q9NRR8 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 AC107375.1-201ENST00000564464 2231 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 HLA-J-202ENST00000469281 1241 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 pRNA.6-201ENST00000610482 90 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 pRNA.5-201ENST00000612139 90 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 MIR6722-201ENST00000617286 78 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 pRNA.11-201ENST00000618423 90 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 pRNA.13-201ENST00000619112 90 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 AC073548.1-201ENST00000624088 1882 ntBASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC8.19□□□□□ -1.1
CDC42SE1Q9NRR8 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC8.18□□□□□ -1.1
CDC42SE1Q9NRR8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms