Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 HCG4P8-203ENST00000443049 980 ntBASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 FAM185BP-201ENST00000443595 716 ntBASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 AC073648.2-201ENST00000510116 352 ntBASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 PRELID1P1-202ENST00000567272 903 ntBASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 AL031055.1-201ENST00000606362 631 ntBASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.21□□□□□ -0.61
CDC42SE2Q9NRR3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 AC126755.1-201ENST00000525846 6405 ntBASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 TMBIM7P-203ENST00000641617 1718 ntBASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
CDC42SE2Q9NRR3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 HMGA1P7-201ENST00000406908 502 ntBASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 AL356488.2-201ENST00000602755 427 ntBASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 AC005593.1-201ENST00000624894 515 ntBASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CDC42SE2Q9NRR3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CDC42SE2Q9NRR3 AC136621.1-201ENST00000624017 2304 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms