Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CBX8Q9HC52 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CBX8Q9HC52 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 AC112693.3-201ENST00000624819 1983 ntBASIC18.15■□□□□ 0.5
CBX8Q9HC52 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 AC012569.1-201ENST00000591191 1524 ntBASIC18.15■□□□□ 0.5
CBX8Q9HC52 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 DUSP5P1-201ENST00000441325 1139 ntBASIC18.15■□□□□ 0.5
CBX8Q9HC52 KRT18P35-201ENST00000510488 1269 ntBASIC18.15■□□□□ 0.5
CBX8Q9HC52 FOSL1P1-201ENST00000511041 816 ntBASIC18.15■□□□□ 0.5
CBX8Q9HC52 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CBX8Q9HC52 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.15■□□□□ 0.5
CBX8Q9HC52 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CBX8Q9HC52 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CBX8Q9HC52 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.14■□□□□ 0.5
CBX8Q9HC52 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CBX8Q9HC52 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.14■□□□□ 0.5
CBX8Q9HC52 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.14■□□□□ 0.5
CBX8Q9HC52 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
CBX8Q9HC52 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 AC092127.1-201ENST00000567093 3455 ntBASIC18.14■□□□□ 0.49
CBX8Q9HC52 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CBX8Q9HC52 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CBX8Q9HC52 AC011477.6-201ENST00000604980 1927 ntBASIC18.13■□□□□ 0.49
CBX8Q9HC52 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CBX8Q9HC52 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.13■□□□□ 0.49
CBX8Q9HC52 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms