Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AC004817.3-201ENST00000602957 2129 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 INTS4P1-201ENST00000438455 1935 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 AP003680.1-201ENST00000598970 3660 ntBASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 AC096582.2-201ENST00000510860 516 ntBASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 AP005901.3-202ENST00000581653 237 ntBASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 TERC-201ENST00000602385 541 ntBASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SND1-IT1Q9HBX3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms